RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 HGSNATQ68CP4 663 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 ERN2Q76MJ5 926 aaKnown RBP22.7■■□□□ 1.22
BEST1-207ENST00000533521 VPS36Q86VN1 386 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 CHST14Q8NCH0 376 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 SERAC1Q96JX3 654 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 SLC6A18Q96N87 628 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 ERVMER34-1Q9H9K5 563 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 PCOLCE2Q9UKZ9 415 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 WASF2Q9Y6W5 498 aa22.7■■□□□ 1.22
BEST1-207ENST00000533521 YKT6O15498 198 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 GSRP00390 522 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 PSMA2P25787 234 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 ITGB7P26010 798 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 CCT8P50990 548 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 PPP2CBP62714 309 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 PPP2CAP67775 309 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 SIM1P81133 766 aaPredicted RBP22.69■■□□□ 1.22
BEST1-207ENST00000533521 TRIP6Q15654 476 aaKnown RBP22.69■■□□□ 1.22
BEST1-207ENST00000533521 SETMARQ53H47 684 aaPredicted RBP22.69■■□□□ 1.22
BEST1-207ENST00000533521 ARSIQ5FYB1 569 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 PYROXD2Q8N2H3 581 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 ARRDC3Q96B67 414 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 CDC6Q99741 560 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 TNKS2Q9H2K2 1166 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 NOL6Q9H6R4 1146 aaKnown RBP22.69■■□□□ 1.22
BEST1-207ENST00000533521 CNOT8Q9UFF9 292 aaKnown RBP22.69■■□□□ 1.22
BEST1-207ENST00000533521 PCDHB9Q9Y5E1 797 aa22.69■■□□□ 1.22
BEST1-207ENST00000533521 PRAMEF26H0Y7S4 382 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 AP1G1O43747 822 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 LEFTY1O75610 366 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 SERPING1P05155 500 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 TPM3P06753 285 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 CCNHP51946 323 aaPredicted RBP22.68■■□□□ 1.22
BEST1-207ENST00000533521 NDST2P52849 883 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 SNRPD1P62314 119 aaKnown RBP22.68■■□□□ 1.22
BEST1-207ENST00000533521 ERMARDQ5T6L9 678 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 OXR1Q8N573 874 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 OR2AP1Q8NGE2 309 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 BAHD1Q8TBE0 780 aaPredicted RBP22.68■■□□□ 1.22
BEST1-207ENST00000533521 OSBPL1AQ9BXW6 950 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 AASDHPPTQ9NRN7 309 aa22.68■■□□□ 1.22
BEST1-207ENST00000533521 LUC7L2Q9Y383 392 aaKnown RBP22.68■■□□□ 1.22
BEST1-207ENST00000533521 DOCK9Q9BZ29 2069 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 A0A1B0GTQ1 180 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 TLR4O00206 839 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 PLK4O00444 970 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 POP4O95707 220 aaKnown RBP22.67■■□□□ 1.22
BEST1-207ENST00000533521 WNT1P04628 370 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 SKILP12757 684 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 PCK1P35558 622 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 HCAR3P49019 387 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 NEK3P51956 506 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 SERINC3Q13530 473 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 KCNT1Q5JUK3 1230 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 ARFGAP1Q8N6T3 406 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 FAM174AQ8TBP5 190 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 RAB7BQ96AH8 199 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 CNTNAP3BQ96NU0 1288 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 ELF4Q99607 663 aaPredicted RBP22.67■■□□□ 1.22
BEST1-207ENST00000533521 CNTNAP3Q9BZ76 1288 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 GDF3Q9NR23 364 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 HECAQ9UBI9 543 aaPredicted RBP22.67■■□□□ 1.22
BEST1-207ENST00000533521 AP4E1Q9UPM8 1137 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 FCF1Q9Y324 198 aaKnown RBP22.67■■□□□ 1.22
BEST1-207ENST00000533521 MFHAS1Q9Y4C4 1052 aa22.67■■□□□ 1.22
BEST1-207ENST00000533521 SPAARA0A1B0GVQ0 90 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 FAM221BA6H8Z2 402 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 H0Y8X5 98 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 CREB3O43889 395 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 HNRNPH3P31942 346 aaKnown RBP22.66■■□□□ 1.22
BEST1-207ENST00000533521 GRK6P43250 576 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 RXRGP48443 463 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 NXPH1P58417 271 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 TPI1P60174 286 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 INAVAQ3KP66 663 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 HORMAD1Q86X24 394 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 GRIN3AQ8TCU5 1115 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 ZNF653Q96CK0 615 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 LRRC19Q9H756 370 aa22.66■■□□□ 1.22
BEST1-207ENST00000533521 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.66■■□□□ 1.22
BEST1-207ENST00000533521 TRPM6Q9BX84 2022 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 EPG5Q9HCE0 2579 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 RASA4BC9J798 803 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 ATMINO43313 823 aaPredicted RBP22.65■■□□□ 1.22
BEST1-207ENST00000533521 RASA4O43374 803 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 PRPSAP2O60256 369 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 FAM193AP78312 1265 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 STAT4Q14765 748 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 ZNF284Q2VY69 593 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 POM121L1PQ3SYA9 428 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 TDRD12Q587J7 1177 aaKnown RBP22.65■■□□□ 1.22
BEST1-207ENST00000533521 TMEM145Q8NBT3 493 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 SETD7Q8WTS6 366 aaKnown RBP22.65■■□□□ 1.22
BEST1-207ENST00000533521 CAMK1GQ96NX5 476 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 IFNKQ9P0W0 207 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 APOBEC2Q9Y235 224 aaKnown RBP22.65■■□□□ 1.22
BEST1-207ENST00000533521 NEUROG3Q9Y4Z2 214 aa22.65■■□□□ 1.22
BEST1-207ENST00000533521 COL5A1P20908 1838 aaPredicted RBP22.65■■□□□ 1.22
BEST1-207ENST00000533521 WNT9AO14904 365 aa22.64■■□□□ 1.21
BEST1-207ENST00000533521 BUB1O43683 1085 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms