RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TRIM4Q9C037 500 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 THAP9Q9H5L6 903 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 SYNDIG1Q9H7V2 258 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 METTL14Q9HCE5 456 aaKnown RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 RMND1Q9NWS8 449 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 ATXN7L1Q9ULK2 861 aaPredicted RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 VANGL2Q9ULK5 521 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 HPSEQ9Y251 543 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 HS3ST2Q9Y278 367 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 SYNJ2BP-COX16A0A087WUM0 186 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 TMX2-CTNND1H3BSU7 103 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 MUSKO15146 869 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 MED7O43513 233 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 PAK4O96013 591 aaPredicted RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 IGLV3-25P01717 112 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 NTRK1P04629 796 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 ITGB2P05107 769 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 CTSLP07711 333 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 ANXA6P08133 673 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 SRCP12931 536 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 GPD2P43304 727 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 RPL34P49207 117 aaKnown RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 FMO5P49326 533 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 NEK3P51956 506 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 CDH4P55283 916 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 CENPCQ03188 943 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 EIF3IQ13347 325 aaKnown RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 AUHQ13825 339 aaKnown RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 PDE1CQ14123 709 aaPredicted RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 SEL1L3Q68CR1 1132 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 ESRP1Q6NXG1 681 aaKnown RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 CRTC1Q6UUV9 634 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 KRBA2Q6ZNG9 492 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 C14orf80Q86SX3 495 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 ZSCAN30Q86W11 494 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 JAMLQ86YT9 394 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 FBXO39Q8N4B4 442 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 EXD3Q8N9H8 876 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 ZSCAN1Q8NBB4 408 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 OR2A12Q8NGT7 310 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 GRIN3AQ8TCU5 1115 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 STK32AQ8WU08 396 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 SLC35C1Q96A29 364 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 SGF29Q96ES7 293 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 PRR11Q96HE9 360 aaPredicted RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 SPATA32Q96LK8 384 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 STRADBQ9C0K7 418 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 DDIT4Q9NX09 232 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 COX16Q9P0S2 106 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 SEPT3Q9UH03 358 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 IL36AQ9UHA7 158 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 ZFR2Q9UPR6 939 aaKnown RBP9.19□□□□□ -0.94
VPS11-203ENST00000529545 TRPM6Q9BX84 2022 aa9.19□□□□□ -0.94
VPS11-203ENST00000529545 A0A1W2PNU3 283 aaPredicted RBP9.18□□□□□ -0.94
VPS11-203ENST00000529545 POM121BA6NF01 834 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 E5RJQ4 531 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 PLD2O14939 933 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 MT-CO1P00395 513 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 RHOCP08134 193 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 KRT5P13647 590 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 NDUFA8P51970 172 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 THOP1P52888 689 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 GCNT1Q02742 428 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS11-203ENST00000529545 PTK2BQ14289 1009 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 COLEC12Q5KU26 742 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 RRAGAQ7L523 313 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 RAB11FIP2Q7L804 512 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 SMYD4Q8IYR2 804 aaPredicted RBP9.18□□□□□ -0.94
VPS11-203ENST00000529545 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
VPS11-203ENST00000529545 CCDC3Q9BQI4 270 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 BOCQ9BWV1 1114 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 SLC13A1Q9BZW2 595 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 SIK2Q9H0K1 926 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 CAAP1Q9H8G2 361 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 GPR27Q9NS67 375 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 STARD5Q9NSY2 213 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 SEPT10Q9P0V9 454 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 APOBEC3BQ9UH17 382 aaKnown RBP9.18□□□□□ -0.94
VPS11-203ENST00000529545 DOLKQ9UPQ8 538 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 TBC1D30Q9Y2I9 924 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 PCDHGA7Q9Y5G6 932 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 OR51B4Q9Y5P0 310 aa9.18□□□□□ -0.94
VPS11-203ENST00000529545 K7ERQ8 282 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 M0QYT0 321 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 NEMP1O14524 444 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
VPS11-203ENST00000529545 PMM2O15305 246 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 SNAP91O60641 907 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 LEFTY1O75610 366 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 LETM1O95202 739 aaPredicted RBP9.17□□□□□ -0.94
VPS11-203ENST00000529545 CALCAP01258 141 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 GLI1P08151 1106 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 ADRB3P13945 408 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 RRM1P23921 792 aa9.17□□□□□ -0.94
VPS11-203ENST00000529545 ITGB7P26010 798 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms