RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PSMA2P25787 234 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 CCNHP51946 323 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 FANCCQ00597 558 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 OGDHQ02218 1023 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 STAT4Q14765 748 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 E4F1Q66K89 784 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 DBX2Q6ZNG2 339 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 ERN2Q76MJ5 926 aaKnown RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 DNAAF5Q86Y56 855 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 PNPLA1Q8N8W4 532 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 KLK6Q92876 244 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 CDC6Q99741 560 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 ZDHHC6Q9H6R6 413 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 GDF3Q9NR23 364 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 HECAQ9UBI9 543 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 FZD10Q9ULW2 581 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 DMTF1Q9Y222 760 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 APOBEC2Q9Y235 224 aaKnown RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 BTBD3Q9Y2F9 522 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 WASF2Q9Y6W5 498 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 TDRD6O60522 2096 aaKnown RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 A0A1B0GTQ1 180 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 A0A1W2PQU0 124 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 PCDHGA12O60330 932 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 CD160O95971 181 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 PRLRP16471 622 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 PRKCIP41743 596 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 GRK6P43250 576 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 AIF1P55008 147 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 RTL3Q8N8U3 475 aaKnown RBP18.9■□□□□ 0.62
CAPN1-203ENST00000525013 MFSD2AQ8NA29 543 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 ISG20Q96AZ6 181 aaKnown RBP18.9■□□□□ 0.62
CAPN1-203ENST00000525013 ELF4Q99607 663 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-203ENST00000525013 HDAC8Q9BY41 377 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 EDEM3Q9BZQ6 932 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 KLK13Q9UKR3 277 aa18.9■□□□□ 0.62
CAPN1-203ENST00000525013 KMT2BQ9UMN6 2715 aaPredicted RBP18.89■□□□□ 0.62
CAPN1-203ENST00000525013 GOLGA8CPA6NN73 597 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 PRAMEF26H0Y7S4 382 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 GOLGA6L19H0YKK7 550 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 SLC31A1O15431 190 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 BUB1O43683 1085 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 KDELR3O43731 214 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 GZMAP12544 262 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 UBASH3AP57075 661 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 NXPH1P58417 271 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 INAVAQ3KP66 663 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 PLEKHA7Q6IQ23 1121 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 NEK5Q6P3R8 708 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 FBXL19Q6PCT2 694 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 UNQ6494/PRO21346Q6UXR6 183 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 GLRX5Q86SX6 157 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 SLCO6A1Q86UG4 719 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 HORMAD1Q86X24 394 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 GATAD2AQ86YP4 633 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 OR6K2Q8NGY2 324 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 MYOCQ99972 504 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 TTYH3Q9C0H2 523 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 CATSPERBQ9H7T0 1116 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 GPATCH2LQ9NWQ4 482 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 CNOT8Q9UFF9 292 aaKnown RBP18.89■□□□□ 0.61
CAPN1-203ENST00000525013 CA5BQ9Y2D0 317 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 NEUROG3Q9Y4Z2 214 aa18.89■□□□□ 0.61
CAPN1-203ENST00000525013 CXorf51AA0A1B0GTR3 108 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 ZSCAN5CA6NGD5 496 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 C1QTNF9BB2RNN3 333 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 KRIT1O00522 736 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 DDX3XO00571 662 aaKnown RBP eCLIP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 MAGEC1O60732 1142 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 C1QTNF9P0C862 333 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 ITGB7P26010 798 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 GKP32189 559 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 ARRB1P49407 418 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 NEK3P51956 506 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 TPI1P60174 286 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 SNRPD1P62314 119 aaKnown RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 RAB44Q7Z6P3 723 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 BAHD1Q8TBE0 780 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 ZNF653Q96CK0 615 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 DHX35Q9H5Z1 703 aaKnown RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 NOL6Q9H6R4 1146 aaKnown RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 MYO1AQ9UBC5 1043 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 PCSK1NQ9UHG2 260 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 AP4E1Q9UPM8 1137 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 KNTC1P50748 2209 aa18.88■□□□□ 0.61
CAPN1-203ENST00000525013 ARID1BQ8NFD5 2236 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-203ENST00000525013 RASA4BC9J798 803 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 RASA4O43374 803 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 RNF8O76064 485 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 GSRP00390 522 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 ITGAVP06756 1048 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 ATXN1LP0C7T5 689 aaKnown RBP18.87■□□□□ 0.61
CAPN1-203ENST00000525013 PTMSP20962 102 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 PTPRBP23467 1997 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 YBEYP58557 167 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-203ENST00000525013 ZNF284Q2VY69 593 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 CCDC157Q569K6 752 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 TDRD12Q587J7 1177 aaKnown RBP18.87■□□□□ 0.61
CAPN1-203ENST00000525013 FIGNQ5HY92 759 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 ATXN7L2Q5T6C5 722 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms