RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SWSAP1Q6NVH7 229 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 KCTD20Q7Z5Y7 419 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ANKRD23Q86SG2 305 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 IQCA1Q86XH1 822 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 KIAA0319LQ8IZA0 1049 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 SRBD1Q8N5C6 995 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 NECAB1Q8N987 351 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 GMCL1P1Q8NEA9 526 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 UBAC1Q9BSL1 405 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 TRMOQ9BU70 441 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ARHGAP39Q9C0H5 1083 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 KAT14Q9H8E8 782 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 JMJD4Q9H9V9 463 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 AS3MTQ9HBK9 375 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ZNF287Q9HBT7 754 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 TXNRD2Q9NNW7 524 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 PDRG1Q9NUG6 133 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 RNF186Q9NXI6 227 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 DDX56Q9NY93 547 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ZIM2Q9NZV7 527 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 STEAP1Q9UHE8 339 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 RIMKLBQ9ULI2 386 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 AGTPBP1Q9UPW5 1226 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 RIPK3Q9Y572 518 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 HS3ST3B1Q9Y662 390 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 CYP46A1Q9Y6A2 500 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 CNTNAP2Q9UHC6 1331 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ARID2Q68CP9 1835 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 MYH9P35579 1960 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CACNA1BQ00975 2339 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 hCG_2014768A0A024R1R8 64 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CCDC69A6NI79 296 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 C19orf81C9J6K1 198 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 JAK2O60674 1132 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 TULP3O75386 442 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 INMTO95050 263 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 HMGB1P09429 215 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 PSG1P11464 419 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CETPP11597 493 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 HGFP14210 728 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 FDPSP14324 419 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 ADRA1DP25100 572 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 ACVR2AP27037 513 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 PSMA5P28066 241 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 MAP2K2P36507 400 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SLC1A4P43007 532 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 NT5C2P49902 561 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CPT1AP50416 773 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SUMO3P55854 103 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SLC14A1Q13336 389 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SLC29A2Q14542 456 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CLCA4Q14CN2 919 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CNN3Q15417 329 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SLC9C1Q4G0N8 1177 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CXorf57Q6NSI4 855 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 MZT2AQ6P582 158 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 C17orf99Q6UX52 265 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 TMTC3Q6ZXV5 915 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 MEPCEQ7L2J0 689 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 PIM3Q86V86 326 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 ADGRF4Q8IZF3 695 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 IGFBPL1Q8WX77 278 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 LPAR1Q92633 364 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 PHKBQ93100 1093 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 GTF3C6Q969F1 213 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 VPS50Q96JG6 964 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 ZBTB45Q96K62 511 aaPredicted RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 LYZL4Q96KX0 146 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 PIGSQ96S52 555 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 PORCNQ9H237 461 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 RANBP17Q9H2T7 1088 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SLC38A10Q9HBR0 1119 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 SACM1LQ9NTJ5 587 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 GJB4Q9NTQ9 266 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 CPNE7Q9UBL6 633 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 L1RE1Q9UN81 338 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 LRP12Q9Y561 859 aa3.32□□□□□ -1.88
CSDE1-208ENST00000524652 DDX49Q9Y6V7 483 aaKnown RBP3.32□□□□□ -1.88
CSDE1-208ENST00000524652 FLNBO75369 2602 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 EVPLQ92817 2033 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ASTN1O14525 1302 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CCDC187A0A096LP49 1063 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ERICH2A1L162 156 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CFAP69A5D8W1 941 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ANKRD62A6NC57 917 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 B4DGG1 531 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 KLRF2D3W0D1 207 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 H3BNX3 289 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 AGPSO00116 658 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 VWA5AO00534 786 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ZBTB43O43298 467 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CA12O43570 354 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 PLA2G6O60733 806 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 PFKFB2O60825 505 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 FLOT1O75955 427 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 MYBP10242 640 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 TXNP10599 105 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 METAP2P50579 478 aaKnown RBP eCLIP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 STAT2P52630 851 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 YPEL5P62699 121 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms