RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TFEBP19484 476 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 RPS6KB1P23443 525 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 GSTM5P46439 218 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 STT3AP46977 705 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 VPS41P49754 854 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 CASP5P51878 434 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 C1QTNF8P60827 252 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 RAE1P78406 368 aaKnown RBP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 B4GALNT1Q00973 533 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 BFSP2Q13515 415 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 RAPGEF1Q13905 1077 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 PRKG1Q13976 671 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 BRD3Q15059 726 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 NECTIN1Q15223 517 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 TRIM71Q2Q1W2 868 aaKnown RBP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 SLC4A8Q2Y0W8 1093 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 IL31Q6EBC2 164 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 TATDN1Q6P1N9 297 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF793Q6ZN11 406 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 MOB2Q70IA6 237 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF444Q8N0Y2 327 aaPredicted RBP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 OR52L2PQ8NGH6 319 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 AKAP1Q92667 903 aaKnown RBP eCLIP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 KAT2BQ92831 832 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 GRAMD1AQ96CP6 724 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 DYNLL2Q96FJ2 89 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 FCRL5Q96RD9 977 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 TRIM2Q9C040 744 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 LSG1Q9H089 658 aaKnown RBP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 ZNF700Q9H0M5 742 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 STARD7Q9NQZ5 370 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 CHST12Q9NRB3 414 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 TMEM45AQ9NWC5 275 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 HEY2Q9UBP5 337 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 IPO11Q9UI26 975 aaKnown RBP3.59□□□□□ -1.83
VPS13B-209ENST00000521559 ANAPC4Q9UJX5 808 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 VPS4AQ9UN37 437 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 SQORQ9Y6N5 450 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 ZMYM6O95789 1325 aa3.59□□□□□ -1.83
VPS13B-209ENST00000521559 COL2A1P02458 1487 aaPredicted RBP3.59□□□□□ -1.84
VPS13B-209ENST00000521559 ARAP2Q8WZ64 1704 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 CACNA1SQ13698 1873 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SCN9AQ15858 1988 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 A0A1W2PPC4 97 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 C2CD4BA6NLJ0 364 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 KPNA5O15131 536 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 PMM2O15305 246 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 PRPF4O43172 522 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 VIPP01282 170 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 MBPP02686 304 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ARP10275 920 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 TKTP29401 623 aaKnown RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SHMT1P34896 483 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 HOXD12P35452 270 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 NT5C2P49902 561 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 NEK3P51956 506 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 AK2P54819 239 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 HUNKP57058 714 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 HAND2P61296 217 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 MTA1Q13330 715 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 FHL3Q13643 280 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ATP1A4Q13733 1029 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 CBFBQ13951 182 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 VGLL4Q14135 290 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 IMMTQ16891 758 aaKnown RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SLC5A9Q2M3M2 681 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 DEFB115Q30KQ5 88 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 MANEAQ5SRI9 462 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 RGMBQ6NW40 437 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 LVRNQ6Q4G3 990 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 RBM44Q6ZP01 1051 aaKnown RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 MFSD6Q6ZSS7 791 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 PIP4P1Q86T03 277 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 DPP9Q86TI2 863 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ERO1BQ86YB8 467 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ZDHHC17Q8IUH5 632 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 TBC1D10CQ8IV04 446 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 CCDC28AQ8IWP9 274 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SAMD14Q8IZD0 417 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SCYL3Q8IZE3 742 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 MMP21Q8N119 569 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SLC44A5Q8NCS7 719 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 TRMT61AQ96FX7 289 aaKnown RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 PRR11Q96HE9 360 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 CLMNQ96JQ2 1002 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 RPS6KC1Q96S38 1066 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 TM2D2Q9BX73 214 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 RNF41Q9H4P4 317 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 DNAJC18Q9H819 358 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ERVK-5Q9HDB9 667 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ASNSD1Q9NWL6 643 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ZMYND8Q9ULU4 1186 aaPredicted RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 ABT1Q9ULW3 272 aaKnown RBP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS13B-209ENST00000521559 PCDHB2Q9Y5E7 798 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SPEF2Q9C093 1822 aa3.58□□□□□ -1.84
VPS13B-209ENST00000521559 SBF1O95248 1867 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms