RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CLDN2P57739 230 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 TGFB2P61812 414 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 COL10A1Q03692 680 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 GOLGA8FQ08AF8 430 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 EPS8Q12929 822 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 RNPS1Q15287 305 aaKnown RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 MED22Q15528 200 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 ME3Q16798 604 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARL13AQ5H913 290 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 HECTD2Q5U5R9 776 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARMC3Q5W041 872 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 TMEM65Q6PI78 240 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 VSTM1Q6UX27 236 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 KRT74Q7RTS7 529 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC29A4Q7RTT9 530 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC46A3Q7Z3Q1 461 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SCML4Q8N228 414 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 C11orf65Q8NCR3 313 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 CADM4Q8NFZ8 388 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 NELL1Q92832 810 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SNAPC3Q92966 411 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARHGEF2Q92974 986 aaKnown RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SAAL1Q96ER3 474 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 PPP1R13BQ96KQ4 1090 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZNF304Q9HCX3 659 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SNTG1Q9NSN8 517 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 FBXO40Q9UH90 709 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 PCDHGB4Q9UN71 923 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SNX8Q9Y5X2 465 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 TRBV5-7A0A0A0MS05 114 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC22A23A1A5C7 686 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 MASP2O00187 686 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 FOXN1O15353 648 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 CCNDBP1O95273 360 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 PLAUP00749 431 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 DNTTP04053 509 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 TUBBP07437 444 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC3A2P08195 630 aaKnown RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 CHRM5P08912 532 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SPARCP09486 303 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SELLP14151 372 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 AKR1A1P14550 325 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 GLULP15104 373 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 TTKP33981 857 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARL3P36405 182 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 CENPAP49450 140 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ANXA2RQ3ZCQ2 193 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SOWAHCQ53LP3 525 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 EARS2Q5JPH6 523 aaKnown RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 RAB41Q5JT25 222 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 PLEKHS1Q5SXH7 462 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ATG9BQ674R7 924 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 JADE1Q6IE81 842 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 KLHL24Q6TFL4 600 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 DHRS13Q6UX07 377 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 DENND5BQ6ZUT9 1274 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 TADA2BQ86TJ2 420 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM160B2Q86V87 743 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 KLBQ86Z14 1044 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARHGAP12Q8IWW6 846 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ADGRF2Q8IZF7 708 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 CAVIN3Q969G5 261 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SARAFQ96BY9 339 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 CHFRQ96EP1 664 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 UROC1Q96N76 676 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 PIMREGQ9BSJ6 248 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 MXD3Q9BW11 206 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SYNCQ9H7C4 482 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 CYP4F11Q9HBI6 524 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 WSB2Q9NYS7 404 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 TFCP2L1Q9NZI6 479 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 IL1RAPL1Q9NZN1 696 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SUCLA2Q9P2R7 463 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARPP21Q9UBL0 812 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 LIMA1Q9UHB6 759 aaKnown RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC25A13Q9UJS0 675 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZNF215Q9UL58 517 aaPredicted RBP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 MKLN1Q9UL63 735 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 A4GNTQ9UNA3 340 aa3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGN1P28-201ENST00000521340 POLR2AP24928 1970 aaKnown RBP3.65□□□□□ -1.82
HMGN1P28-201ENST00000521340 CYP2D7A0A087X1C5 515 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A1W2PRG0 241 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 CXorf65A6NEN9 183 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 BTBD18B2RXH4 712 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM157AC9JC47 383 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 NPIPB11E5RHQ5 1161 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 SH2B2O14492 632 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 AP3D1O14617 1153 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 TP73O15350 636 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 CCNT1O60563 726 aaKnown RBP3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 ENTPD3O75355 529 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 BEST1O76090 585 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 LATS1O95835 1130 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 ST6GAL1P15907 406 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 GABRB1P18505 474 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 FMO4P31512 558 aa3.65□□□□□ -1.83
HMGN1P28-201ENST00000521340 PIP4K2AP48426 406 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms