RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 CBX4O00257 560 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 CDH16O75309 829 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 PAPLNO95428 1278 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-209ENST00000519141 STX2P32856 288 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 NUMBP49757 651 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 CDH17Q12864 832 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 MPP3Q13368 585 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 OLIG2Q13516 323 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 KCNC3Q14003 757 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 RFTN1Q14699 578 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-209ENST00000519141 ZNF77Q15935 545 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 SKIDA1Q1XH10 827 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 KLHL38Q2WGJ6 581 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 TPGS1Q6ZTW0 290 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 CCNJLQ8IV13 435 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 MPP5Q8N3R9 675 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 RIBC1Q8N443 379 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-209ENST00000519141 SH2D3CQ8N5H7 860 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 FAM76AQ8TAV0 307 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 FBF1Q8TES7 1133 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 IMP4Q96G21 291 aaKnown RBP12.58□□□□□ -0.4
SPIDR-209ENST00000519141 NAT9Q9BTE0 207 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 FSD1LQ9BXM9 530 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 POLR1EQ9GZS1 481 aaKnown RBP12.58□□□□□ -0.4
SPIDR-209ENST00000519141 IGFLR1Q9H665 355 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 ACSS3Q9H6R3 686 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 VPS45Q9NRW7 570 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 SEPT3Q9UH03 358 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 VPS28Q9UK41 221 aa12.58□□□□□ -0.4
SPIDR-209ENST00000519141 TCRBV9S1A1TA0A576 114 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PMPCBO75439 489 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 AGTP01019 485 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 TCF3P15923 654 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PGAM1P18669 254 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 MAXP61244 160 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 DSC2Q02487 901 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CCDC85BQ15834 202 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 FSCBQ5H9T9 825 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 RARS2Q5T160 578 aaKnown RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 UNC5AQ6ZN44 842 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 ARID3BQ8IVW6 561 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 GSDMBQ8TAX9 411 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 RIN3Q8TB24 985 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 ITFG1Q8TB96 612 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 ZSWIM3Q96MP5 696 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 XPO6Q96QU8 1125 aaKnown RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CYTH2Q99418 400 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 APOL2Q9BQE5 337 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 FICDQ9BVA6 458 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 NSUN3Q9H649 340 aaKnown RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 KIF9Q9HAQ2 790 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 SYBUQ9NX95 663 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 TBC1D14Q9P2M4 693 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 FETUBQ9UGM5 382 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 RABGEF1Q9UJ41 708 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 NOVA2Q9UNW9 492 aaKnown RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 MTCH2Q9Y6C9 303 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 C5orf42Q9H799 3197 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 POC1B-GALNT4F8VUJ3 575 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 GLDCP23378 1020 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 MZF1P28698 734 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 ATP5DP30049 168 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CSKP41240 450 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CD86P42081 329 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 NPY2RP49146 381 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 GEMIN4P57678 1058 aaKnown RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CRADDP78560 199 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 CBX2Q14781 532 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PRPF39Q86UA1 669 aaKnown RBP12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PGBD5Q8N414 524 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 DCAF4L2Q8NA75 395 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 WFDC5Q8TCV5 224 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PSKH2Q96QS6 385 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PRDM6Q9NQX0 595 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PLK2Q9NYY3 685 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 LGALS13Q9UHV8 139 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 SLC24A2Q9UI40 661 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 BDP1A6H8Y1 2624 aa12.57□□□□□ -0.4
SPIDR-209ENST00000519141 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-209ENST00000519141 DLL1O00548 723 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
SPIDR-209ENST00000519141 NR1D1P20393 614 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 FSHRP23945 695 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 WNT3AP56704 352 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 NIPAL4Q0D2K0 466 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 EFTUD2Q15029 972 aaKnown RBP eCLIP12.56□□□□□ -0.4
SPIDR-209ENST00000519141 PCSK7Q16549 785 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 FYB2Q5VWT5 728 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 RNF43Q68DV7 783 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 ALG1LQ6GMV1 187 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 KDELC1Q6UW63 502 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 TDRPQ86YL5 185 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 CELF5Q8N6W0 485 aaKnown RBP12.56□□□□□ -0.4
SPIDR-209ENST00000519141 FIBINQ8TAL6 211 aa12.56□□□□□ -0.4
SPIDR-209ENST00000519141 ARRDC2Q8TBH0 407 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms