RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ZNF792Q3KQV3 632 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 LRRC8EQ6NSJ5 796 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 PDZD4Q76G19 769 aaPredicted RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 DENND6AQ8IWF6 608 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 KDM1BQ8NB78 822 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TMEM40Q8WWA1 233 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 DPF3Q92784 378 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 NTAN1Q96AB6 310 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TMA16Q96EY4 203 aaKnown RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TEKT5Q96M29 485 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 GPR78Q96P69 363 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 SLC9A7Q96T83 725 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TMEM30AQ9NV96 361 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 FBXW11Q9UKB1 542 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 NCAM2O15394 837 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TADA2AO75478 443 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 IREB2P48200 963 aaKnown RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 MPP1Q00013 466 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 SCAPQ12770 1279 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 CTBP1Q13363 440 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 ART3Q13508 389 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 SLC12A1Q13621 1099 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 IYDQ6PHW0 289 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 SETD3Q86TU7 594 aaPredicted RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TMEM126BQ8IUX1 230 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 GPC2Q8N158 579 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 CNTD1Q8N815 330 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 ADCY4Q8NFM4 1077 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 NXNL1Q96CM4 212 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 CELF6Q96J87 481 aaKnown RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 KIFC1Q9BW19 673 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 FTHL17Q9BXU8 183 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 GRIP2Q9C0E4 1043 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 RBM38Q9H0Z9 239 aaKnown RBP16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 Q9H521 79 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 VTI1BQ9UEU0 232 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 TRHDEQ9UKU6 1024 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 RAD54BQ9Y620 910 aa16.8■□□□□ 0.28
PCDHGA11-202ENST00000518882 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 RNASEH2AO75792 299 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 MMP3P08254 477 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 CYP2C9P11712 490 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 WARSP23381 471 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 HK2P52789 917 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 CDH17Q12864 832 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 HERC3Q15034 1050 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 SV2CQ496J9 727 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 ITPRIPL1Q6GPH6 555 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 CCNYL1Q8N7R7 359 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 TMEM102Q8N9M5 508 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 ARRDC4Q8NCT1 418 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 SPATA22Q8NHS9 363 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 USP33Q8TEY7 942 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 PDCD6IPQ8WUM4 868 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 MED10Q9BTT4 135 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 EFCAB1Q9HAE3 211 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 VTA1Q9NP79 307 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 DDIT4Q9NX09 232 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 PIN4Q9Y237 131 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 VAPBO95292 243 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 CAPNS1P04632 268 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 NCAM1P13591 858 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 DARSP14868 501 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 HADHAP40939 763 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 PNPLA4P41247 253 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 DAOAP59103 153 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 GK5Q6ZS86 529 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 EZH1Q92800 747 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 ZNF419Q96HQ0 510 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 DNAJC1Q96KC8 554 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 TSNARE1Q96NA8 513 aa16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 PRPF18Q99633 342 aaKnown RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
PCDHGA11-202ENST00000518882 A0A1B0GTW7 788 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 SNAI1O95863 264 aaPredicted RBP16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 SMPD1P17405 629 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 ADSLP30566 484 aaPredicted RBP16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 RGS2P41220 211 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 BAG6P46379 1132 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 HCAR3P49019 387 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 CCNA1P78396 465 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 MYLK3Q32MK0 819 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 EML3Q32P44 896 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 AHI1Q8N157 1196 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 B4GALNT2Q8NHY0 566 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 ZNF696Q9H7X3 374 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 ACOT9Q9Y305 439 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 CENPFP49454 3210 aa16.78■□□□□ 0.28
PCDHGA11-202ENST00000518882 SLCO1B7G3V0H7 640 aa16.77■□□□□ 0.28
PCDHGA11-202ENST00000518882 SDHDO14521 159 aa16.77■□□□□ 0.28
PCDHGA11-202ENST00000518882 TNFAIP8O95379 198 aa16.77■□□□□ 0.28
PCDHGA11-202ENST00000518882 MT-CYBP00156 380 aaPredicted RBP16.77■□□□□ 0.28
PCDHGA11-202ENST00000518882 USP17L7P0C7H9 530 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms