RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 KCNJ18B7U540 433 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 F8W8V4 182 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 BOLA2-SMG1P6H3BVE0 249 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 OAZ2O95190 189 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 BAG2O95816 211 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 EFEMP2O95967 443 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 AFPP02771 609 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 MYF5P13349 255 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CD58P19256 250 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ACAT1P24752 427 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 LMO2P25791 158 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CFPP27918 469 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CASQ1P31415 396 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 LTBRP36941 435 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RAP1GAPP47736 663 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ALDH1A3P47895 512 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 LHX1P48742 406 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ALDH9A1P49189 494 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 FMO5P49326 533 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 AARSP49588 968 aaKnown RBP eCLIP2.88□□□□□ -1.95
SKP1-204ENST00000517691 MECP2P51608 486 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 AGFG1P52594 562 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CLNS1AP54105 237 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 ADKP55263 362 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CDH8P55286 799 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 IFI35P80217 286 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 MRPS35P82673 323 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 MYL7Q01449 175 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CYP27A1Q02318 531 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PPARDQ03181 441 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 DLX2Q07687 328 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 DUSP4Q13115 394 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 KCNJ12Q14500 433 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SOWAHAQ2M3V2 549 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PGS1Q32NB8 556 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ZACNQ401N2 412 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ANO6Q4KMQ2 910 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CBWD6Q4V339 395 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TMEM177Q53S58 311 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CBWD3Q5JTY5 395 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CBWD5Q5RIA9 395 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PPM1LQ5SGD2 360 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 C1orf220Q5T0J3 134 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MBLAC2Q68D91 279 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SPOPLQ6IQ16 392 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ANKRD54Q6NXT1 300 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 C11orf57Q6ZUT1 292 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 SDCCAG8Q86SQ7 713 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 MTDHQ86UE4 582 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 MOGAT3Q86VF5 341 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 NLRP14Q86W24 1093 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CEP97Q8IW35 865 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ZC3H7AQ8IWR0 971 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 DCP1BQ8IZD4 617 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 TMEM86AQ8N2M4 240 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CCDC33Q8N5R6 958 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ZNF655Q8N720 491 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 RNF152Q8N8N0 203 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CHST14Q8NCH0 376 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RCBTB1Q8NDN9 531 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 FBXL13Q8NEE6 735 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ANKRD20A12PQ8NF67 263 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 VN1R2Q8NFZ6 395 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GOT1L1Q8NHS2 421 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 ZNF461Q8TAF7 563 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PIWIL2Q8TC59 973 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 TAS1R2Q8TE23 839 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SLC22A17Q8WUG5 538 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RSAD2Q8WXG1 361 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TAF4BQ92750 862 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SLC35C1Q96A29 364 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RBM18Q96H35 190 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CNOT6LQ96LI5 555 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 TSGA13Q96PP4 275 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TMEM209Q96SK2 561 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SEPT5Q99719 369 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 NCAPGQ9BPX3 1015 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ZFYVE21Q9BQ24 234 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TREX2Q9BQ50 279 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 FAM83CQ9BQN1 747 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CDIP1Q9H305 208 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 KCNF1Q9H3M0 494 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PLEKHA4Q9H4M7 779 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 THAP9Q9H5L6 903 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SMYD3Q9H7B4 428 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SAMSN1Q9NSI8 373 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 COMMD8Q9NX08 183 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 DNAJC28Q9NX36 388 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RAB20Q9NX57 234 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TRMT1Q9NXH9 659 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 GDAP2Q9NXN4 497 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 DDX43Q9NXZ2 648 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CLEC1BQ9P126 229 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 VPS28Q9UK41 221 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GTF3C4Q9UKN8 822 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PCDHGB4Q9UN71 923 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 NFE2L3Q9Y4A8 694 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 IKBKGQ9Y6K9 419 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CDH23Q9H251 3354 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 WDR27A2RRH5 827 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms