RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 GIMAP8Q8ND71 665 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 U2AF1L4Q8WU68 220 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCTD4Q8WVF5 259 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRIB2Q92519 343 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 NCLNQ969V3 563 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SHISA4Q96DD7 197 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 VWCEQ96DN2 955 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CMTM5Q96DZ9 223 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTCD3Q96EY7 689 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAGED4Q96JG8 741 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TBATAQ96M53 351 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC6A18Q96N87 628 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SERPINI1Q99574 410 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MLPHQ9BV36 600 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 KIFC1Q9BW19 673 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 OSBPL11Q9BXB4 747 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 FRMD8Q9BZ67 464 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 DCLK3Q9C098 648 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SIAEQ9HAT2 523 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 POLD4Q9HCU8 107 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 WDR6Q9NNW5 1121 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 TUFT1Q9NNX1 390 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GCM1Q9NP62 436 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MRPL40Q9NQ50 206 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 RPRD1BQ9NQG5 326 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 HOMER2Q9NSB8 354 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PNPLA3Q9NST1 481 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 DTLQ9NZJ0 730 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCDC59Q9P031 241 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 EXTL2Q9UBQ6 330 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 FBXO40Q9UH90 709 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 AMACRQ9UHK6 382 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 EVLQ9UI08 416 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 IPO11Q9UI26 975 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 GMEB2Q9UKD1 530 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 FBXL21Q9UKT6 434 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZBTB21Q9ULJ3 1066 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 PACSIN2Q9UNF0 486 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF281Q9Y2X9 895 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 RBMX2Q9Y388 322 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 NEU2Q9Y3R4 380 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT2A1Q9Y4X1 527 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 SRPRBQ9Y5M8 271 aaKnown RBP4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CACNG2Q9Y698 323 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCNE2Q9Y6J6 123 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CDC42BPGQ6DT37 1551 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CACNA1FO60840 1977 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 ITSN1Q15811 1721 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 CRYBG1Q9Y4K1 1723 aa4.89□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAGI1Q96QZ7 1491 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 MLH3Q9UHC1 1453 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 WNK3Q9BYP7 1800 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A0A6YYK5 440 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PNMA6EA0A0J9YXQ4 647 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 A0A1W2PQ67 120 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 B2RBV5 119 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 ATP6V1G2-DDX39BF2Z307 99 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMD12O00232 456 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 TNFRSF10CO14798 259 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANGPT2O15123 496 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 KCNN4O15554 427 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 HOXC11O43248 304 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 MSI1O43347 362 aaKnown RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PI15O43692 258 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PEX10O60683 326 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 GAS7O60861 476 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 SEMA7AO75326 666 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 GCATO75600 419 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 CRTAPO75718 401 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 IDH1O75874 414 aaKnown RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 CLPXO76031 633 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 EFEMP2O95967 443 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 APOA1P02647 267 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 SERPING1P05155 500 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRAPPC2P0DI81 140 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRAPPC2BP0DI82 140 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PRKAR1AP10644 381 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 ATP6V1B1P15313 513 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCNA2P20248 432 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 DCKP27707 260 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PCSK6P29122 969 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 EEF1DP29692 281 aaKnown RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PDIA3P30101 505 aaKnown RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 CHRNA3P32297 505 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 CXCR5P32302 372 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 ALDH1A3P47895 512 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 NPTX2P47972 431 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 HOXA1P49639 335 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 BMXP51813 675 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 COPAP53621 1224 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMD4P55036 377 aaKnown RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 CTSWP56202 376 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTENP60484 403 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 EIF4A1P60842 406 aaKnown RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 IFI35P80217 286 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 MYBPC1Q00872 1141 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 IFITM2Q01629 132 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAP1Q03518 808 aa4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 GFPT1Q06210 699 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P19-201ENST00000517578 PPARAQ07869 468 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms