RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TRAF7Q6Q0C0 670 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 BNC2Q6ZN30 1099 aaPredicted RBP7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 ACAD11Q709F0 780 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 PLPPR4Q7Z2D5 763 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 TSPYL5Q86VY4 417 aaPredicted RBP7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM192Q8IY95 271 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 RNF149Q8NC42 400 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 COPS5Q92905 334 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 TAMM41Q96BW9 452 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 SLITRK1Q96PX8 696 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 GAS2L1Q99501 681 aaPredicted RBP7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 WNT5BQ9H1J7 359 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 MINDY3Q9H8M7 445 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 ELP3Q9H9T3 547 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 CRLF2Q9HC73 371 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 MOV10Q9HCE1 1003 aaKnown RBP7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 SNTG2Q9NY99 539 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 TRPM5Q9NZQ8 1165 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 CYTH4Q9UIA0 394 aa7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 MRPS7Q9Y2R9 242 aaKnown RBP7.59□□□□□ -1.2
PDLIM5-219ENST00000514743 KRT36O76013 467 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 DDNO94850 711 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 SRGAP2CP0DJJ0 459 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CETPP11597 493 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 PKLRP30613 574 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 GNALP38405 381 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CALCOCO2Q13137 446 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 OASLQ15646 514 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM16LQ309B1 348 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 PLA2G4EQ3MJ16 856 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 INO80DQ53TQ3 878 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 OGFOD2Q6N063 350 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 MOB2Q70IA6 237 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 ADAMTSL2Q86TH1 951 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 FBXO16Q8IX29 292 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 IPMKQ8NFU5 416 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CHPT1Q8WUD6 406 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 MLPHQ9BV36 600 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 NIF3L1Q9GZT8 377 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 FZD8Q9H461 694 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CCDC134Q9H6E4 229 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 SP110Q9HB58 689 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 RXFP1Q9HBX9 757 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 SYTL2Q9HCH5 934 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 ADGRE2Q9UHX3 823 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 F8VP50 259 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 RASGRF2O14827 1237 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 NDUFA2O43678 99 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 PI15O43692 258 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 RSL1D1O76021 490 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 LSM8O95777 96 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 HMGN1P05114 100 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 ARFIP1P53367 373 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 TPTEP56180 551 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 MBTD1Q05BQ5 628 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP2A13Q16696 494 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CCDC142Q17RM4 750 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 NADK2Q4G0N4 442 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 RTP2Q5QGT7 225 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 EEF1DP3Q658K8 133 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 BEND4Q6ZU67 534 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 RFX8Q6ZV50 586 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 IKBIPQ70UQ0 350 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 CCDC36Q8IYA8 594 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 TBC1D21Q8IYX1 336 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 ANKRD42Q8N9B4 389 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 GRK7Q8WTQ7 553 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 MCEEQ96PE7 176 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 OLFM1Q99784 485 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 SEC22CQ9BRL7 303 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 LRMDAQ9H2I8 198 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 LIN7BQ9HAP6 207 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 FAM105AQ9NUU6 356 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 NINJ2Q9NZG7 142 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 TXNDC16Q9P2K2 825 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 TJP2Q9UDY2 1190 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 GRID1Q9ULK0 1009 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 SPATA2Q9UM82 520 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 MAPRE3Q9UPY8 281 aa7.58□□□□□ -1.2
PDLIM5-219ENST00000514743 C3orf70A6NLC5 250 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 GOLGA8SH3BPF8 625 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 LIASO43766 372 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CCDC22O60826 627 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TTC4O95801 387 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CLPTM1O96005 669 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 LTA4HP09960 611 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 WEE2P0C1S8 567 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 GPD2P43304 727 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ASMTP46597 345 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 GDI2P50395 445 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 RASSF2P50749 326 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CLCN4P51793 760 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC12A2P55011 1212 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SRP54P61011 504 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MXD4Q14582 209 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SSPNQ14714 243 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 KHDC1Q4VXA5 237 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms