RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TCEAL2Q9H3H9 227 aaPredicted RBP11.18□□□□□ -0.62
DDX41-216ENST00000513562 ST7Q9NRC1 585 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 SEPT10Q9P0V9 454 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 IL36AQ9UHA7 158 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 USP25Q9UHP3 1055 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 VPS51Q9UID3 782 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 PADI4Q9UM07 663 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 FADS3Q9Y5Q0 445 aa11.18□□□□□ -0.62
DDX41-216ENST00000513562 CETN3O15182 167 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 YY2O15391 372 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 AP1G1O43747 822 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 SNAP91O60641 907 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 CLDN11O75508 207 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 LEFTY1O75610 366 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 CALCAP01258 141 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 ANXA6P08133 673 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 JMJD7P0C870 316 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 PFKFB1P16118 471 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 RRM1P23921 792 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 CCR1P32246 355 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 ACADSBP45954 432 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 ADKP55263 362 aaKnown RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 YWHAZP63104 245 aaKnown RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 CYP4F2P78329 520 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 KRT83P78385 493 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 C1orf61Q13536 156 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 C5orf22Q49AR2 442 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 TCERG1LQ5VWI1 586 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 ESRP1Q6NXG1 681 aaKnown RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 PHACTR4Q8IZ21 702 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 FEM1CQ96JP0 617 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 GFM1Q96RP9 751 aaKnown RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 C2orf49Q9BVC5 232 aaPredicted RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 FOXP3Q9BZS1 431 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 CLPBQ9H078 707 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 MUC3BQ9H195 1237 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 ADNPQ9H2P0 1102 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 FAM204AQ9H8W3 233 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 PISDQ9UG56 409 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 VANGL2Q9ULK5 521 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 PNMA8BQ9ULN7 279 aaPredicted RBP11.17□□□□□ -0.62
DDX41-216ENST00000513562 MAN2B2Q9Y2E5 1009 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 PCDHB4Q9Y5E5 795 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
DDX41-216ENST00000513562 SPENQ96T58 3664 aaKnown RBP11.16□□□□□ -0.62
DDX41-216ENST00000513562 A0A1W2PQM1 296 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 SLC16A3O15427 465 aaKnown RBP11.16□□□□□ -0.62
DDX41-216ENST00000513562 TSHRP16473 764 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 ITGB7P26010 798 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 CDH4P55283 916 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 DPYDQ12882 1025 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 MTA1Q13330 715 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 PTK2BQ14289 1009 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
DDX41-216ENST00000513562 C22orf39Q6P5X5 142 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
DDX41-216ENST00000513562 DPY19L3Q6ZPD9 716 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 DTX1Q86Y01 620 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 ARL10Q8N8L6 244 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 DCAF4L2Q8NA75 395 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 KYQ8NBH2 561 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 ASB12Q8WXK4 309 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 KAT5Q92993 513 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 SLC35C1Q96A29 364 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 CCDC74AQ96AQ1 378 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 TMEM74Q96NL1 305 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 TNKS2Q9H2K2 1166 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 DDIT4Q9NX09 232 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 HS3ST4Q9Y661 456 aa11.16□□□□□ -0.62
DDX41-216ENST00000513562 MYO9AB2RTY4 2548 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 PRAMEF33A0A0G2JMD5 474 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 A0A1B0GVL5 298 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 A0A1W2PQ27 194 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 A0A1W2PQ64 194 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 A0A1W2PQC6 194 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 IGLON5A6NGN9 336 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 E5RJQ4 531 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 PRAMEF10O60809 474 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 ZNF821O75541 412 aaPredicted RBP11.15□□□□□ -0.62
DDX41-216ENST00000513562 RPLP0P05388 317 aaKnown RBP11.15□□□□□ -0.62
DDX41-216ENST00000513562 RHOCP08134 193 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 ITIH1P19827 911 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 L1CAMP32004 1257 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 GGCXP38435 758 aa11.15□□□□□ -0.62
DDX41-216ENST00000513562 RECQLP46063 649 aaPredicted RBP11.15□□□□□ -0.62
DDX41-216ENST00000513562 CCL7P80098 99 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms