RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OR1N1Q8NGS0 311 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 NEK9Q8TD19 979 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 DENND1AQ8TEH3 1009 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 ARNTL2Q8WYA1 636 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 RSC1A1Q92681 617 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 EDC3Q96F86 508 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 PRR11Q96HE9 360 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 MMS19Q96T76 1030 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 RTKNQ9BST9 563 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 CIPCQ9C0C6 399 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 VPS45Q9NRW7 570 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 GAR1Q9NY12 217 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 DACT1Q9NYF0 836 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 SERGEFQ9UGK8 458 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 BTBD3Q9Y2F9 522 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 MED23Q9ULK4 1368 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 NUP98P52948 1817 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 TCRBV5S1A1TA0A578 114 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 EIF4E1BA6NMX2 242 aaKnown RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 H3BQ06 376 aaPredicted RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 TRIM38O00635 465 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 CTIFO43310 598 aaKnown RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 KCNAB3O43448 404 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 PIP5K1CO60331 668 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 EXOC3O60645 756 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 MBPP02686 304 aaPredicted RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 IGKV2-30P06310 120 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 ITGA2BP08514 1039 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 APEHP13798 732 aaKnown RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 MYOGP15173 224 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 KLRK1P26718 216 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 GRK6P43250 576 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 GPC5P78333 572 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 CFHR3Q02985 330 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 ZRSR2Q15696 482 aaKnown RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 TMEM119Q4V9L6 283 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 INO80DQ53TQ3 878 aaPredicted RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 TMEM63BQ5T3F8 832 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 MFSD14CQ5VZR4 134 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 ANO1Q5XXA6 986 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 LIN54Q6MZP7 749 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 CCDC144NLQ6NUI1 221 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 TTC30AQ86WT1 665 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 NGEFQ8N5V2 710 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 MYCT1Q8N699 235 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 FAM71DQ8N9W8 422 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 SPATA5Q8NB90 893 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 STT3BQ8TCJ2 826 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 RUBCNQ92622 972 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 DAZAP1Q96EP5 407 aaKnown RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 KAZALD1Q96I82 304 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 PAAF1Q9BRP4 392 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 MAGEH1Q9H213 219 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 SAP30LQ9HAJ7 183 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 ASIC5Q9NY37 505 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 SH3BP4Q9P0V3 963 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 LRFN1Q9P244 771 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 BPTFQ12830 3046 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 ARAP2Q8WZ64 1704 aa4□□□□□ -1.77
TOPBP1-208ENST00000511439 COL4A4P53420 1690 aaPredicted RBP4□□□□□ -1.77
TOPBP1-208ENST00000511439 UTYO14607 1347 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 SALL1Q9NSC2 1324 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 GBF1Q92538 1859 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 GXYLT2A0PJZ3 443 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 H3BNC9 293 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 PPP6CO00743 305 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 FCHO1O14526 889 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 CXCL11O14625 94 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TP73O15350 636 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 PRAMEF2O60811 474 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 MOSPD3O75425 235 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 MT-CO3P00414 261 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 FGBP02675 491 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TUBB4AP04350 444 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TMIGD3P0DMS9 266 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 CSF2RAP15509 400 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 ATF7P17544 494 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 RGS2P41220 211 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 GSTM5P46439 218 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 RENBPP51606 427 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 RBM5P52756 815 aaKnown RBP eCLIP3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 COPB1P53618 953 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 POLE2P56282 527 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TXNL4AP83876 142 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 ARHGAP8P85298 464 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 CCDC15Q0P6D6 951 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 SEMA3BQ13214 749 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 BFSP2Q13515 415 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 PROSER3Q2NL68 480 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TTLL5Q6EMB2 1281 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TANGO2Q6ICL3 276 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 RINT1Q6NUQ1 792 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 ANKRD42Q8N9B4 389 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 WDR60Q8WVS4 1066 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 CCT6BQ92526 530 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 CINPQ9BW66 212 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 CHMP4AQ9BY43 222 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 TMEM39BQ9GZU3 492 aa3.99□□□□□ -1.77
TOPBP1-208ENST00000511439 COA1Q9GZY4 146 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms