RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 FSD1LQ9BXM9 530 aa12.81□□□□□ -0.36
LYSMD3-204ENST00000509384 ZNF576Q9H609 170 aa12.81□□□□□ -0.36
LYSMD3-204ENST00000509384 CASS4Q9NQ75 786 aa12.81□□□□□ -0.36
LYSMD3-204ENST00000509384 BFARQ9NZS9 450 aa12.81□□□□□ -0.36
LYSMD3-204ENST00000509384 TRANK1O15050 2925 aa12.81□□□□□ -0.36
LYSMD3-204ENST00000509384 DOCK4Q8N1I0 1966 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 EXOC1LA0A1B0GW35 172 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 SLC9A3R1O14745 358 aaPredicted RBP12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 SNAP91O60641 907 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 SHOX2O60902 331 aaPredicted RBP12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 PMPCBO75439 489 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 TCEA3O75764 348 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 GSTA2P09210 222 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 STX2P32856 288 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 CD86P42081 329 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 DSC2Q02487 901 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 NIPAL4Q0D2K0 466 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 CDH17Q12864 832 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 RNF43Q68DV7 783 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 PGBD5Q8N414 524 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 FIBINQ8TAL6 211 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 FBF1Q8TES7 1133 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 MGME1Q9BQP7 344 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 VPS45Q9NRW7 570 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 SYBUQ9NX95 663 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 SAMD15Q9P1V8 674 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 KIAA1522Q9P206 1035 aaPredicted RBP12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 VPS51Q9UID3 782 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 OR51B4Q9Y5P0 310 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 ACTL7AQ9Y615 435 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 WNT6Q9Y6F9 365 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 CDH23Q9H251 3354 aa12.8□□□□□ -0.36
LYSMD3-204ENST00000509384 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 HOXB8P17481 243 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 WNT3AP56704 352 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 CRADDP78560 199 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 ARF5P84085 180 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 LMAN2Q12907 356 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 PCSK7Q16549 785 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 KLHL38Q2WGJ6 581 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 AGBL2Q5U5Z8 902 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 EMC10Q5UCC4 262 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 SYCE2Q6PIF2 218 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 KDELC1Q6UW63 502 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 CCNJLQ8IV13 435 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 KIAA1958Q8N8K9 716 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 FGF13Q92913 245 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 IRF7Q92985 503 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 ALG14Q96F25 216 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 PSKH2Q96QS6 385 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 SEMA3CQ99985 751 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 NAT9Q9BTE0 207 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 BBS2Q9BXC9 721 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 PRO3102Q9H379 93 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 PPCSQ9HAB8 311 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 ATG2AQ2TAZ0 1938 aa12.79□□□□□ -0.36
LYSMD3-204ENST00000509384 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 SRRM3A6NNA2 597 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 MUSKO15146 869 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ZMPSTE24O75844 475 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 TMCC1O94876 653 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 AGTP01019 485 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 MMP2P08253 660 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 PGAM1P18669 254 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ADRA1AP35348 466 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 NPY2RP49146 381 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 SKOR1P84550 965 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 FAM78AQ5JUQ0 283 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 KCTD16Q68DU8 428 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ALG1LQ6GMV1 187 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 LINGO4Q6UY18 593 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ZNF557Q8N988 423 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 GSDMBQ8TAX9 411 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ARRDC2Q8TBH0 407 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 PGM2Q96G03 612 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ASB16Q96NS5 453 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 IL22Q9GZX6 179 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 FAM107BQ9H098 131 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 ACSS3Q9H6R3 686 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 GDE1Q9NZC3 331 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 RABGEF1Q9UJ41 708 aa12.78□□□□□ -0.36
LYSMD3-204ENST00000509384 CDH22Q9UJ99 828 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms