RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 OR2I1PQ8NGU4 316 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 OR14C36Q8NHC7 312 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 LRRN4Q8WUT4 740 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 HSPH1Q92598 858 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ALG3Q92685 438 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 PTPRN2Q92932 1015 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 FAM129BQ96TA1 746 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ZDHHC5Q9C0B5 715 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 NEUROG2Q9H2A3 272 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 DHX35Q9H5Z1 703 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ATP13A1Q9HD20 1204 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 DYRK4Q9NR20 520 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 PPARGC1AQ9UBK2 798 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 PACSIN2Q9UNF0 486 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ALG6Q9Y672 507 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ANKRD36A6QL64 1941 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 PLXND1Q9Y4D7 1925 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 TNRC6BQ9UPQ9 1833 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3DA0A087WVF3 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3IA0A087WXS9 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3EA0A087X179 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3KA0A087X1G2 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 A0A1B0GVT2 93 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 ILVBLA1L0T0 632 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 MACROD2A1Z1Q3 448 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3FA6NER0 549 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 WASH4PA8MWX3 477 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3LB9A6J9 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 K7ERQ8 282 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 GIPC1O14908 333 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 DDX3YO15523 660 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 ATP9BO43861 1147 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 CREB3O43889 395 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 PRPSAP2O60256 369 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 ADRB1P08588 477 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3HP0C7X1 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 CSRP1P21291 193 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 AMPD1P23109 780 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 CD27P26842 260 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 CSNK1EP49674 416 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 C21orf59P57076 290 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 ARF5P84085 180 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 ACAP1Q15027 740 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 LLGL1Q15334 1064 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TAZQ16635 292 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 EFHC2Q5JST6 749 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 AFMIDQ63HM1 303 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 KIAA0895LQ68EN5 471 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3GQ6DHY5 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3CQ6IPX1 549 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 NCEH1Q6PIU2 408 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 IL27RAQ6UWB1 636 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 LINGO4Q6UY18 593 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 NT5DC3Q86UY8 548 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 RHOT2Q8IXI1 618 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D3Q8IZP1 549 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 C17orf53Q8N3J3 647 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 RYBPQ8N488 228 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 SH2D3CQ8N5H7 860 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 DCAF4L2Q8NA75 395 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 OR2T34Q8NGX1 318 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 PCDH19Q8TAB3 1148 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 FRS2Q8WU20 508 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TEKT4Q8WW24 435 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 SKA1Q96BD8 255 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 BIRC7Q96CA5 298 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 FAF2Q96CS3 445 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D31Q96DN5 1066 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 NSMCE3Q96MG7 304 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 CSPG4P5Q96PW8 444 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 GAREM1Q9H706 876 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 LRRC19Q9H756 370 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 AASDHPPTQ9NRN7 309 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 TMEM248Q9NWD8 314 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 SERGEFQ9UGK8 458 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 DNAI1Q9UI46 699 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 VPS51Q9UID3 782 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 FZD4Q9ULV1 537 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 HPCAL4Q9UM19 191 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 PPP2R2CQ9Y2T4 447 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 PCDHB9Q9Y5E1 797 aa8.92□□□□□ -0.98
PDLIM5-213ENST00000509357 CNOT1A5YKK6 2376 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 PLK4O00444 970 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 KPNA3O00505 521 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 MCF2LO15068 1137 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 SMAD6O43541 496 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 PALMO75781 387 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 CER1O95813 267 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 FTCDO95954 541 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 SRCP12931 536 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 CEACAM1P13688 526 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 RHOQP17081 205 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 ERCC2P18074 760 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 ETFBP38117 255 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 PEX5P50542 639 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 CLCN6P51797 869 aa8.91□□□□□ -0.98
PDLIM5-213ENST00000509357 METAP1P53582 386 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms