RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CHEK2O96017 543 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 ABHD2P08910 425 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 PRPS2P11908 318 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 TATP17735 454 aaPredicted RBP7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 GBP1P32455 592 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 PPP1R2P41236 205 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 SLC15A1P46059 708 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 CDKN1BP46527 198 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 KCNJ1P48048 391 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 KHKP50053 298 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 JAM2P57087 298 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 KRT31Q15323 416 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 KIZQ2M2Z5 673 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 GPAT3Q53EU6 434 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 COLEC12Q5KU26 742 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 TBC1D9BQ66K14 1250 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 PPP1R2P3Q6NXS1 205 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 CYFIP1Q7L576 1253 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 PLEKHH3Q7Z736 793 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 VPS36Q86VN1 386 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 FAM185AQ8N0U4 392 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 CSGALNACT2Q8N6G5 542 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 SETD9Q8NE22 299 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 RFKQ969G6 155 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 SLAMF9Q96A28 289 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 ERO1AQ96HE7 468 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 ALS2CR12Q96Q35 445 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 NEU1Q99519 415 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 PKP2Q99959 881 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 FERMT1Q9BQL6 677 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 TLR10Q9BXR5 811 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 SLC32A1Q9H598 525 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 NCDNQ9UBB6 729 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 DNAJB11Q9UBS4 358 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 SARDHQ9UL12 918 aa7.65□□□□□ -1.18
PDGFRA-206ENST00000508170 A0A1W2PPW3 197 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ZNF561-AS1K7EIQ3 104 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RNF225M0QZC1 329 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PCDH17O14917 1159 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SLCO2B1O94956 709 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 UQCRFS1P1P0C7P4 283 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ERCC2P18074 760 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RPL13P26373 211 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ACTR3P61158 418 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 HYAL2Q12891 473 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 AIMP2Q13155 320 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CRYMQ14894 314 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 DPY19L1Q2PZI1 675 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PLA1AQ53H76 456 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 KHDC1LQ5JSQ8 128 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CFAP157Q5JU67 520 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RAP1GAP2Q684P5 730 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 TRIM65Q6PJ69 517 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ZNF852Q6ZMS4 543 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 TTLL6Q8N841 843 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CCDC150Q8NCX0 1101 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CMASQ8NFW8 434 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ELMO3Q96BJ8 720 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RBM41Q96IZ5 413 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 NSUN5Q96P11 429 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 TRIM54Q9BYV2 358 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ZNF552Q9H707 407 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SEC63Q9UGP8 760 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 KIAA1217Q5T5P2 1943 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ATP10BO94823 1461 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SYNGAP1Q96PV0 1343 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 UHRF1BP1Q6BDS2 1440 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 TRIM49BA6NDI0 452 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 BTBD18B2RXH4 712 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 TSPAN4O14817 238 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ZNF185O15231 689 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RASAL1O95294 804 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RETP07949 1114 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 HOXB1P14653 301 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 KRT15P19012 456 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CALB2P22676 271 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 KLRK1P26718 216 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 GABRB2P47870 512 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ARFIP2P53365 341 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 LGALS4P56470 323 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SCGB2A2Q13296 93 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RRS1Q15050 365 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 FASTKD1Q53R41 847 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 NAIF1Q69YI7 327 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RBPMS2Q6ZRY4 209 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 SPATA21Q7Z572 469 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 CEP57Q86XR8 500 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 ENDOVQ8N8Q3 282 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 NHLRC2Q8NBF2 726 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PIK3C3Q8NEB9 887 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 TRPV1Q8NER1 839 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 OR2I1PQ8NGU4 316 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 BRIX1Q8TDN6 353 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PDCD6IPQ8WUM4 868 aaKnown RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 FRAT1Q92837 279 aaPredicted RBP7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 RAB24Q969Q5 203 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 AZIN2Q96A70 460 aa7.64□□□□□ -1.19
PDGFRA-206ENST00000508170 PTERQ96BW5 349 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms