RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF766Q5HY98 468 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 UBAP2Q5T6F2 1119 aaKnown RBP3.09□□□□□ -1.91
GYPB-207ENST00000506679 FAM83HQ6ZRV2 1179 aaPredicted RBP3.09□□□□□ -1.91
GYPB-207ENST00000506679 C9orf47Q6ZRZ4 202 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 SLC16A12Q6ZSM3 486 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 MON1AQ86VX9 555 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 TMC8Q8IU68 726 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 CAMK1DQ8IU85 385 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 HORMAD2Q8N7B1 307 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 TEX45Q8NA69 505 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 C7orf57Q8NEG2 295 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 MCPH1Q8NEM0 835 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 ZMIZ2Q8NF64 920 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 HSPH1Q92598 858 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 CNOT9Q92600 299 aaKnown RBP3.09□□□□□ -1.91
GYPB-207ENST00000506679 ZNF333Q96JL9 665 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 EYA3Q99504 573 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 WDR6Q9NNW5 1121 aaKnown RBP3.09□□□□□ -1.91
GYPB-207ENST00000506679 ENTPD7Q9NQZ7 604 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 BEX4Q9NWD9 120 aaPredicted RBP3.09□□□□□ -1.91
GYPB-207ENST00000506679 CDH22Q9UJ99 828 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 SLC13A4Q9UKG4 626 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 TBX20Q9UMR3 447 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 CNPY2Q9Y2B0 182 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 RAP2CQ9Y3L5 183 aa3.09□□□□□ -1.91
GYPB-207ENST00000506679 CCDC196A0A1B0GTZ2 297 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 CD8B2A6NJW9 211 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 TEX22C9J3V5 150 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 H0YGN5 161 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 STMND1H3BQB6 276 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 I6L893 689 aaPredicted RBP3.08□□□□□ -1.92
GYPB-207ENST00000506679 KIF1CO43896 1103 aaKnown RBP3.08□□□□□ -1.92
GYPB-207ENST00000506679 GUCY1B2O75343 617 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 SOX30O94993 753 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 CBX6O95503 412 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 NTN1O95631 604 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 SYF2O95926 243 aaKnown RBP3.08□□□□□ -1.92
GYPB-207ENST00000506679 MMP3P08254 477 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 HNRNPA1P09651 372 aaKnown RBP eCLIP3.08□□□□□ -1.92
GYPB-207ENST00000506679 ARSBP15848 533 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 CTPS1P17812 591 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 YWHAQP27348 245 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 DCTDP32321 178 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 TTKP33981 857 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 PGM1P36871 562 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 AVPR1AP37288 418 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 GPR12P47775 334 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 PPP3CCP48454 512 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ARSFP54793 590 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ZP1P60852 638 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 TRAF1Q13077 416 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 BAK1Q16611 211 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ZNF667Q5HYK9 610 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 EPHA10Q5JZY3 1008 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 WASHC2DQ5SRD0 308 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 HEPHL1Q6MZM0 1159 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 PRSS45Q7RTY3 260 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 RBFAQ8N0V3 343 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 GHDCQ8N2G8 530 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 CPXM2Q8N436 756 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 TMEM199Q8N511 208 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ZNF366Q8N895 744 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 RUFY2Q8WXA3 655 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ZBTB9Q96C00 473 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ZBTB10Q96DT7 871 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 AGXT2Q9BYV1 514 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ISCUQ9H1K1 167 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 PLAC1Q9HBJ0 212 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 KRCC1Q9NPI7 259 aaPredicted RBP3.08□□□□□ -1.92
GYPB-207ENST00000506679 ALKBH4Q9NXW9 302 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 C9orf78Q9NZ63 289 aaPredicted RBP3.08□□□□□ -1.92
GYPB-207ENST00000506679 HCN3Q9P1Z3 774 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 ADGRF5Q8IZF2 1346 aa3.08□□□□□ -1.92
GYPB-207ENST00000506679 A0A096LPK6 155 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 CCDC189A1A4V9 331 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 CLEC18AA5D8T8 446 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 PABPN1LA6NDY0 278 aaKnown RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 H3BNX3 289 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 EBAG9O00559 213 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 TNFRSF13BO14836 293 aaPredicted RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 KCNAB3O43448 404 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 LDB2O43679 373 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 CEP104O60308 925 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 IL1AP01583 271 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 URODP06132 367 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 ENO3P13929 434 aaPredicted RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 ARRB2P32121 409 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 RYKP34925 604 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 RFX5P48382 616 aaPredicted RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 TUBP50607 506 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 CCT4P50991 539 aaKnown RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 PGGT1BP53609 377 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 FOXG1P55316 489 aaPredicted RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 PPATQ06203 517 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 MAPK7Q13164 816 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 NAA25Q14CX7 972 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 ZNF284Q2VY69 593 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 HSP90AB4PQ58FF6 505 aa3.07□□□□□ -1.92
GYPB-207ENST00000506679 INTS11Q5TA45 600 aaKnown RBP3.07□□□□□ -1.92
GYPB-207ENST00000506679 SLC9C2Q5TAH2 1124 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms