RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 OTOP3Q7RTS5 596 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 USP33Q8TEY7 942 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 FEM1CQ96JP0 617 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 TMEM120AQ9BXJ8 343 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.49□□□□□ -0.57
NFKB1-205ENST00000505458 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 SSX2IPQ9Y2D8 614 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 MIA3Q5JRA6 1907 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 A0A087X1B8 175 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 USP12O75317 370 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 CLDN11O75508 207 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 SOD2P04179 222 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 FGF1P05230 155 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 DLDP09622 509 aaKnown RBP11.49□□□□□ -0.57
NFKB1-205ENST00000505458 GPR15P49685 360 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 WNT3AP56704 352 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 SLC12A1Q13621 1099 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 HSP90AA5PQ58FG0 334 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 ALG1LQ6GMV1 187 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 FSTL4Q6MZW2 842 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 CLEC14AQ86T13 490 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 NACA2Q9H009 215 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 COPG2Q9UBF2 871 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 APOBEC2Q9Y235 224 aaKnown RBP11.49□□□□□ -0.57
NFKB1-205ENST00000505458 CDY1Q9Y6F8 540 aa11.49□□□□□ -0.57
NFKB1-205ENST00000505458 PRAMEF11O60813 436 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SERPINB5P36952 375 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 DUSP4Q13115 394 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 ZNF235Q14590 738 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SLC39A5Q6ZMH5 540 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CLNKQ7Z7G1 428 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 HMCESQ96FZ2 354 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 NOL6Q9H6R4 1146 aaKnown RBP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 TREX1Q9NSU2 369 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 MPP6Q9NZW5 540 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 A0A096LPK6 155 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 A0A0G2JND7 137 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SLC7A4O43246 635 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CPA3P15088 417 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CALB2P22676 271 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 PPM1AP35813 382 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CLCN5P51795 746 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 POU4F1Q01851 419 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 RAP1GAP2Q684P5 730 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 PACS2Q86VP3 889 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 ZC3HC1Q86WB0 502 aaKnown RBP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CMTR2Q8IYT2 770 aaKnown RBP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SKA1Q96BD8 255 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 TADA1Q96BN2 335 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 MFSD3Q96ES6 412 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 MRGPRX2Q96LB1 330 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 DEFB118Q96PH6 123 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CHRAC1Q9NRG0 131 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 UTRNP46939 3433 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 PEX11BO96011 259 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 PTPN4P29074 926 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SLC26A3P40879 764 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 ALDH1A3P47895 512 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CD151P48509 253 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 ELF3P78545 371 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 DENND5AQ6IQ26 1287 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SETD3Q86TU7 594 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-205ENST00000505458 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 NETO2Q8NC67 525 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 ZNF461Q8TAF7 563 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 TMEM169Q96HH4 297 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CWH43Q9H720 699 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 SEPT3Q9UH03 358 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 PSAT1Q9Y617 370 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 LTBP2Q14767 1821 aa11.48□□□□□ -0.57
NFKB1-205ENST00000505458 CHUKO15111 745 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 CCL5P13501 91 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 OR1E1P30953 314 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 HNRNPH1P31943 449 aaKnown RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 SLC12A2P55011 1212 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 LBRQ14739 615 aaKnown RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 TAF12Q16514 161 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ARHGAP36Q6ZRI8 547 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ITIH5Q86UX2 942 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 PIWIL2Q8TC59 973 aaKnown RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 CCDC126Q96EE4 140 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ZNF512Q96ME7 567 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 NT5MQ9NPB1 228 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ZNF212Q9UDV6 495 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 SLCO1B7G3V0H7 640 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 RALBP11234 206 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 NMBRP28336 390 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 MNAT1P51948 309 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms