RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ARHGAP12Q8IWW6 846 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 TMEM217Q8N7C4 229 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 CCDC191Q8NCU4 936 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 KAT2BQ92831 832 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 JAKMIP2Q96AA8 810 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 REPS1Q96D71 796 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 WDFY2Q96P53 400 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 H2AFJQ9BTM1 129 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 FRMD8Q9BZ67 464 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 CXorf56Q9H5V9 222 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 MMRN2Q9H8L6 949 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 GRHL1Q9NZI5 618 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 RAPGEFL1Q9UHV5 662 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 PCDHGB5Q9Y5G0 923 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 A0A1W2PQ09 198 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 A0A1W2PQF6 199 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GRID2IPA4D2P6 1211 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 DKC1O60832 514 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 OR2C1O95371 312 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 DDAH2O95865 285 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 HEXAP06865 529 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 IRF1P10914 325 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 EIF2DP41214 584 aaKnown RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GNAQP50148 359 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 SOX10P56693 466 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 SIM1P81133 766 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 MTA1Q13330 715 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 FRG1Q14331 258 aaKnown RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 IRF3Q14653 427 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 TXNDC8Q6A555 127 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GPR139Q6DWJ6 353 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 CHST9Q7L1S5 443 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GPAT4Q86UL3 456 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 CAGE1Q8TC20 777 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GDPD5Q8WTR4 605 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 PIGKQ92643 395 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GTF3C6Q969F1 213 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 FCRL5Q96RD9 977 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 BAG1Q99933 345 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GLIS2Q9BZE0 524 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 POLR1BQ9H9Y6 1135 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 SH3BP4Q9P0V3 963 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 CFDP1Q9UEE9 299 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 GIMAP2Q9UG22 337 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 CHORDC1Q9UHD1 332 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 HAO1Q9UJM8 370 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 KAT6AQ92794 2004 aa5.6□□□□□ -1.51
HMGB1P3-201ENST00000502802 SNAP23O00161 211 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 TAF4O00268 1085 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 MSI1O43347 362 aaKnown RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 USP12O75317 370 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 CHRM5P08912 532 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 SLC2A4P14672 509 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 ST6GAL1P15907 406 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 MCM3P25205 808 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 TACR3P29371 465 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 CHRNA5P30532 468 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 UBA7P41226 1012 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 GABRB2P47870 512 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 ARSFP54793 590 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 CDH8P55286 799 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 CTSWP56202 376 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 CEBPZQ03701 1054 aaKnown RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 NIPAL4Q0D2K0 466 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 LRMPQ12912 555 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 CSTF3Q12996 717 aaKnown RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 GALNT3Q14435 633 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 PUM1Q14671 1186 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 VEPH1Q14D04 833 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 RAB41Q5JT25 222 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 NAA16Q6N069 864 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 RBM44Q6ZP01 1051 aaKnown RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 GSTA5Q7RTV2 222 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 AMER2Q8N7J2 671 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 FAR1Q8WVX9 515 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 NEU4Q8WWR8 484 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 PSPC1Q8WXF1 523 aaKnown RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 RADILQ96JH8 1075 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 SPATS2LQ9NUQ6 558 aaKnown RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 SUCLA2Q9P2R7 463 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 SLC8A2Q9UPR5 921 aa5.59□□□□□ -1.51
HMGB1P3-201ENST00000502802 MST1RQ04912 1400 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 A0A1W2PRG0 241 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 CXorf65A6NEN9 183 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 USP17L23D6RBM5 183 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 FOXD2O60548 495 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 CLTBP09497 229 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 PLA2G5P39877 138 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 EFEMP1Q12805 493 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 RASA2Q15283 850 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 RNPS1Q15287 305 aaKnown RBP5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 HIST2H2ACQ16777 129 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 ME3Q16798 604 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 ALDH1L2Q3SY69 923 aa5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 CERKLQ49MI3 558 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 RPUSD3Q6P087 351 aaKnown RBP5.58□□□□□ -1.52
HMGB1P3-201ENST00000502802 TSSK4Q6SA08 328 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms