RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 ENTPD7Q9NQZ7 604 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 RBM12Q9NTZ6 932 aaKnown RBP4.83□□□□□ -1.64
RBM39-240ENST00000495293 BLOC1S4Q9NUP1 217 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 PANK4Q9NVE7 773 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 ANO10Q9NW15 660 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 SPG21Q9NZD8 308 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 SEL1LQ9UBV2 794 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 HOOK1Q9UJC3 728 aaKnown RBP4.83□□□□□ -1.64
RBM39-240ENST00000495293 TUBD1Q9UJT1 453 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 AJAP1Q9UKB5 411 aaPredicted RBP4.83□□□□□ -1.64
RBM39-240ENST00000495293 RCOR1Q9UKL0 485 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 PNMA8BQ9ULN7 279 aaPredicted RBP4.83□□□□□ -1.64
RBM39-240ENST00000495293 PCDHA7Q9UN72 937 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 COG5Q9UP83 839 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 RUVBL1Q9Y265 456 aaKnown RBP4.83□□□□□ -1.64
RBM39-240ENST00000495293 TNFSF13BQ9Y275 285 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 SSX2IPQ9Y2D8 614 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 ACTL7AQ9Y615 435 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 MTCH2Q9Y6C9 303 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 MYH11P35749 1972 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 MYH15Q9Y2K3 1946 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 NLRC5Q86WI3 1866 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 COL4A6Q14031 1691 aa4.83□□□□□ -1.64
RBM39-240ENST00000495293 ARL5CA6NH57 179 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 DRGXA6NNA5 263 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 DIRC3C9JPN6 131 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 HNRNPDLO14979 420 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 POLR2DO15514 142 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 XPOTO43592 962 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 PCDHGA12O60330 932 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PHF2O75151 1096 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TADA2AO75478 443 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TOM1L1O75674 476 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 SNUPNO95149 360 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 CSPG5O95196 566 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 GCNT3O95395 438 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 GASTP01350 101 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 THP07101 528 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PF4V1P10720 104 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 MCF2P10911 925 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 HARSP12081 509 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 MTHFD2P13995 350 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 CMA1P23946 247 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 MLH1P40692 756 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PER3P56645 1201 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 OSTNP61366 133 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 ASIC1P78348 528 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 GRIK3Q13003 919 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 ALCAMQ13740 583 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 SMC1AQ14683 1233 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 POSTNQ15063 836 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 CAMK4Q16566 473 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 STX1AQ16623 288 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TPD52L1Q16890 204 aaPredicted RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 MINDY4Q4G0A6 757 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 CLLU1OSQ5K130 101 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 C10orf62Q5T681 223 aaPredicted RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 AGAP9Q5VTM2 703 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 RESP18Q5W5W9 173 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 B3GNTL1Q67FW5 361 aaPredicted RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 USP49Q70CQ1 688 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 GLCCI1Q86VQ1 547 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TMEM161BQ8NDZ6 487 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 SPPL3Q8TCT6 385 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 CCHCR1Q8TD31 782 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 NRG4Q8WWG1 115 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 MRPS27Q92552 414 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 HVCN1Q96D96 273 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 ACCSQ96QU6 501 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 GAD1Q99259 594 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 ACO2Q99798 780 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 ADI1Q9BV57 179 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 CLSTN2Q9H4D0 955 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 NXF3Q9H4D5 531 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 PDZD7Q9H5P4 517 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 CWH43Q9H720 699 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TMEM206Q9H813 350 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 BCO1Q9HAY6 547 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 SLC38A7Q9NVC3 462 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TBC1D13Q9NVG8 400 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 THEGQ9P2T0 379 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 LZTS1Q9Y250 596 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 ANKRD6Q9Y2G4 727 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 HES2Q9Y543 173 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PCDHGA9Q9Y5G4 932 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 PCDHGA8Q9Y5G5 932 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PCDHGA7Q9Y5G6 932 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PCDHGA6Q9Y5G7 932 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 PCDHGA3Q9Y5H0 932 aa4.82□□□□□ -1.64
RBM39-240ENST00000495293 RANBP2P49792 3224 aaKnown RBP4.82□□□□□ -1.64
RBM39-240ENST00000495293 FNDC1Q4ZHG4 1894 aaPredicted RBP4.81□□□□□ -1.64
RBM39-240ENST00000495293 ZMYM2Q9UBW7 1377 aa4.81□□□□□ -1.64
RBM39-240ENST00000495293 A0A1B0GVL5 298 aa4.81□□□□□ -1.64
RBM39-240ENST00000495293 EPOPA6NHQ4 379 aa4.81□□□□□ -1.64
RBM39-240ENST00000495293 MYMKA6NI61 221 aa4.81□□□□□ -1.64
RBM39-240ENST00000495293 SMTNL1A8MU46 457 aa4.81□□□□□ -1.64
RBM39-240ENST00000495293 NT5C1B-RDH14C9J2C7 533 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms