RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 CYTH1Q15438 398 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 FAXCQ5TGI0 409 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 ANKRD22Q5VYY1 191 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 NAIF1Q69YI7 327 aaPredicted RBP12.3□□□□□ -0.44
BRD3-206ENST00000494743 ITPRIPL1Q6GPH6 555 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 HIBCHQ6NVY1 386 aaPredicted RBP12.3□□□□□ -0.44
BRD3-206ENST00000494743 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 CCNI2Q6ZMN8 369 aaPredicted RBP12.3□□□□□ -0.44
BRD3-206ENST00000494743 PID1Q7Z2X4 250 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 HOOK3Q86VS8 718 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 NAT8LQ8N9F0 302 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 BBOF1Q8ND07 529 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 WFIKKN2Q8TEU8 576 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 PRCCQ92733 491 aaPredicted RBP12.3□□□□□ -0.44
BRD3-206ENST00000494743 TADA1Q96BN2 335 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 FCRL5Q96RD9 977 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 BRD9Q9H8M2 597 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 GLOD4Q9HC38 313 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 DEC1Q9P2X7 70 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 LIMD1Q9UGP4 676 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 SEPT3Q9UH03 358 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 RSPH14Q9UHP6 348 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 SHOC2Q9UQ13 582 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 FAM50BQ9Y247 325 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 HS3ST2Q9Y278 367 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 ZFHX2Q9C0A1 2572 aaPredicted RBP12.3□□□□□ -0.44
BRD3-206ENST00000494743 BPTFQ12830 3046 aa12.3□□□□□ -0.44
BRD3-206ENST00000494743 TCRBV7S3A2A0A539 114 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 NDC80O14777 642 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 TMEM63AO94886 807 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 TPSB2P20231 275 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 MCM3P25205 808 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 RGRP47804 291 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 PLTPP55058 493 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 GEMIN4P57678 1058 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 BASP1P80723 227 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 ECT2LQ008S8 904 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 CAV1Q03135 178 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 SULT2A1Q06520 285 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 SLC20A2Q08357 652 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 NIPAL4Q0D2K0 466 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 ZNF235Q14590 738 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 IHHQ14623 411 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 TPSAB1Q15661 275 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 MBLAC2Q68D91 279 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 KCTD11Q693B1 232 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 GRAMD4Q6IC98 578 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 PCGF5Q86SE9 256 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 PPIL6Q8IXY8 311 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 GSPT2Q8IYD1 628 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 TAB3Q8N5C8 712 aaPredicted RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 TERB1Q8NA31 727 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 TSEN2Q8NCE0 465 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 TTC8Q8TAM2 541 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 ARRDC2Q8TBH0 407 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.29□□□□□ -0.44
BRD3-206ENST00000494743 EXOC4Q96A65 974 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 IMP4Q96G21 291 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 OXNAD1Q96HP4 312 aaPredicted RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 MRGPRX3Q96LB0 322 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 MLPHQ9BV36 600 aaPredicted RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 POLR1EQ9GZS1 481 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 SLC25A51Q9H1U9 297 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 NT5MQ9NPB1 228 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 EIF2B3Q9NR50 452 aaKnown RBP12.29□□□□□ -0.44
BRD3-206ENST00000494743 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 NFU1Q9UMS0 254 aa12.29□□□□□ -0.44
BRD3-206ENST00000494743 COL4A2P08572 1712 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 PRRT4C9JH25 899 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 F5H423 210 aaPredicted RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 K7ERQ8 282 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 SMAPO00193 183 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 SMAD6O43541 496 aaKnown RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 ZNF821O75541 412 aaPredicted RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 GJB3O75712 270 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 ASGR2P07307 311 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 MMP2P08253 660 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 SRCP12931 536 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 CR2P20023 1033 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 HSPA9P38646 679 aaKnown RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 SOX9P48436 509 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 STK19P49842 368 aaPredicted RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 MAXP61244 160 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 ZNF534Q76KX8 674 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
BRD3-206ENST00000494743 SFTPA1Q8IWL2 248 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 BBS5Q8N3I7 341 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 SH2D3CQ8N5H7 860 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 PRSS33Q8NF86 280 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 SPATA22Q8NHS9 363 aa12.28□□□□□ -0.44
BRD3-206ENST00000494743 CSGALNACT1Q8TDX6 532 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms