RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HEPHQ9BQS7 1158 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 LLPHQ9BRT6 129 aaKnown RBP4.96□□□□□ -1.62
RTN4-215ENST00000491592 TTPALQ9BTX7 342 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 FAM107BQ9H098 131 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 TASP1Q9H6P5 420 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 C17orf75Q9HAS0 396 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 SEPSECSQ9HD40 501 aaKnown RBP4.96□□□□□ -1.62
RTN4-215ENST00000491592 TM7SF3Q9NS93 570 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 TMEM160Q9NX00 188 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 AKAP7Q9P0M2 348 aaPredicted RBP4.96□□□□□ -1.62
RTN4-215ENST00000491592 COX16Q9P0S2 106 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 HMG20BQ9P0W2 317 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 ACTR3BQ9P1U1 418 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 CTTNBP2NLQ9P2B4 639 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 RCOR1Q9UKL0 485 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 GRID1Q9ULK0 1009 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 TBX20Q9UMR3 447 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 EXOC6BQ9Y2D4 811 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 PLEKHM1Q9Y4G2 1056 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 NOX1Q9Y5S8 564 aa4.96□□□□□ -1.62
RTN4-215ENST00000491592 NRKQ7Z2Y5 1582 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MLH3Q9UHC1 1453 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CHD1O14646 1710 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 A0A0U1RQK1 487 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ZNF320A2RRD8 509 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CCDC151A5D8V7 595 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ISM1B1AKI9 464 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MYO1CO00159 1063 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 WDR46O15213 610 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 EXOC3O60645 756 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 KINO60870 393 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 KRT38O76015 456 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CDKL5O76039 1030 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ZFPL1O95159 310 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 NDUFA10O95299 355 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 HLA-DOAP06340 250 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 UBTFL1P0CB47 393 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 PTPN2P17706 415 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CHRM3P20309 590 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SFPQP23246 707 aaKnown RBP eCLIP4.95□□□□□ -1.62
RTN4-215ENST00000491592 SP100P23497 879 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 DDX6P26196 483 aaKnown RBP eCLIP4.95□□□□□ -1.623e-51■□□□□ 9.7
RTN4-215ENST00000491592 PTGS2P35354 604 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 EPS15P42566 896 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MAGEA9P43362 315 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ATP5OP48047 213 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ZNF41P51814 821 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 GTF2A1P52655 376 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 HMGA2P52926 109 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ARFIP1P53367 373 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CCNA1P78396 465 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ACTN3Q08043 901 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 SLC13A2Q13183 592 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 FOXE3Q13461 319 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CUL4BQ13620 913 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 NECTIN1Q15223 517 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ZRSR1Q15695 479 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 CNGA2Q16280 664 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 KYNUQ16719 465 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ME3Q16798 604 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 IMMTQ16891 758 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 KRT24Q2M2I5 525 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ERCC6LQ2NKX8 1250 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SMU1Q2TAY7 513 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 KBTBD12Q3ZCT8 623 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 FAM160B1Q5W0V3 765 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ARMC6Q6NXE6 501 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 BLOC1S2Q6QNY1 142 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 PPP1R21Q6ZMI0 780 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 LEKR1Q6ZMV7 388 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 R3HCC1LQ7Z5L2 792 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 CPLX4Q7Z7G2 160 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 METTL23Q86XA0 190 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 HERC6Q8IVU3 1022 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SYNE4Q8N205 404 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 DCLK2Q8N568 766 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 USP38Q8NB14 1042 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 PSD4Q8NDX1 1056 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 GMCL1P1Q8NEA9 526 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 FAM46DQ8NEK8 389 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 FAM71BQ8TC56 605 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ZNF483Q8TF39 744 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 CUL5Q93034 780 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 TUBGCP3Q96CW5 907 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MYEOVQ96EZ4 313 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SUCLG2Q96I99 432 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 PRAM1Q96QH2 718 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 UTP14AQ9BVJ6 771 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 ALOXE3Q9BYJ1 711 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 GPR63Q9BZJ6 419 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SLC7A5P2Q9GIP4 190 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MMADHCQ9H3L0 296 aaPredicted RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 NRDE2Q9H7Z3 1164 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 MID1IP1Q9NPA3 183 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SNTG1Q9NSN8 517 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 STK32BQ9NY57 414 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 AATFQ9NY61 560 aaKnown RBP eCLIP4.95□□□□□ -1.62
RTN4-215ENST00000491592 TAS2R3Q9NYW6 316 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CPNE7Q9UBL6 633 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms