RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ACBD5Q5T8D3 534 aaPredicted RBP12.54□□□□□ -0.4
TTC3-221ENST00000488522 TRIM65Q6PJ69 517 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
TTC3-221ENST00000488522 C14orf80Q86SX3 495 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 SHC3Q92529 594 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
TTC3-221ENST00000488522 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 NPY6RQ99463 290 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 DPH1Q9BZG8 443 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 NDST4Q9H3R1 872 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 UBE2TQ9NPD8 197 aaPredicted RBP12.54□□□□□ -0.4
TTC3-221ENST00000488522 ACP6Q9NPH0 428 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 NCKIPSDQ9NZQ3 722 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 ZNF212Q9UDV6 495 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 VPS51Q9UID3 782 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 CSNK1G3Q9Y6M4 447 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 CHD5Q8TDI0 1954 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 SPTY2D1-AS1A0A0U1RR47 76 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 DRGXA6NNA5 263 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 I6L893 689 aaPredicted RBP12.53□□□□□ -0.4
TTC3-221ENST00000488522 K7ESM1 405 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 RNF103O00237 685 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 KPNA3O00505 521 aaPredicted RBP12.53□□□□□ -0.4
TTC3-221ENST00000488522 FFAR2O15552 330 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 AP1G1O43747 822 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 SNAP91O60641 907 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
TTC3-221ENST00000488522 ZNF821O75541 412 aaPredicted RBP12.53□□□□□ -0.4
TTC3-221ENST00000488522 MPOP05164 745 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 NOS2P35228 1153 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 CXCR3P49682 368 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 NUMBP49757 651 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 COPB1P53618 953 aaKnown RBP12.53□□□□□ -0.4
TTC3-221ENST00000488522 ALFQ53S48 1182 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 BROXQ5VW32 411 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 KIAA1161Q6NSJ0 714 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
TTC3-221ENST00000488522 C22orf39Q6P5X5 142 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 ZNF783Q6ZMS7 281 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 ZDHHC17Q8IUH5 632 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 TTC9Q92623 222 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 RNF34Q969K3 372 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 PPP1R16AQ96I34 528 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 BMFQ96LC9 184 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 CALN1Q9BXU9 219 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 CEP44Q9C0F1 390 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 VPS16Q9H269 839 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 THSD1Q9NS62 852 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 PCDHGA8Q9Y5G5 932 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 WASF2Q9Y6W5 498 aa12.53□□□□□ -0.4
TTC3-221ENST00000488522 HECTD1Q9ULT8 2610 aa12.52□□□□□ -0.4
TTC3-221ENST00000488522 GTPBP10A4D1E9 387 aaKnown RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 J3QKU1 62 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 K7ERQ8 282 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 USP12O75317 370 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 CNTN5O94779 1100 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 SERPINC1P01008 464 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 ERBB2P04626 1255 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 RHOCP08134 193 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 ITGB7P26010 798 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 SCNN1AP37088 669 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 GGCXP38435 758 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 MLLT3P42568 568 aaPredicted RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 NEK3P51956 506 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 CLDN2P57739 230 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 RPS21P63220 83 aaKnown RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 FGL2Q14314 439 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 FZD2Q14332 565 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 ISXQ2M1V0 245 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 PTPN20Q4JDL3 420 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 FILIP1LQ4L180 1135 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 SEL1L3Q68CR1 1132 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 GBP6Q6ZN66 633 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 Q6ZSR6 202 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 TMC6Q7Z403 805 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 PARGQ86W56 976 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 ATP11CQ8NB49 1132 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 CHST14Q8NCH0 376 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 ZNF548Q8NEK5 533 aaPredicted RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 ASB12Q8WXK4 309 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 TBATAQ96M53 351 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 LENG8Q96PV6 779 aaPredicted RBP12.52□□□□□ -0.41
TTC3-221ENST00000488522 MYOCQ99972 504 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 FZD3Q9NPG1 666 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 DYRK4Q9NR20 520 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 PIGVQ9NUD9 493 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 IL36AQ9UHA7 158 aa12.52□□□□□ -0.41
TTC3-221ENST00000488522 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms