RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 FUT10Q6P4F1 479 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 MED25Q71SY5 747 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 TBC1D10CQ8IV04 446 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 CCDC60Q8IWA6 550 aaPredicted RBP4.79□□□□□ -1.64
CNN3-206ENST00000487539 MFSD6LQ8IWD5 586 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 MIER2Q8N344 545 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 MINDY1Q8N5J2 469 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 NLGN4YQ8NFZ3 816 aaPredicted RBP4.79□□□□□ -1.64
CNN3-206ENST00000487539 LNX1Q8TBB1 728 aaPredicted RBP4.79□□□□□ -1.64
CNN3-206ENST00000487539 HASPINQ8TF76 798 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 GPATCH3Q96I76 525 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 FNBP1Q96RU3 617 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 NACAP1Q9BZK3 213 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 ZNF768Q9H5H4 540 aaKnown RBP4.79□□□□□ -1.64
CNN3-206ENST00000487539 MAP3K20Q9NYL2 800 aaKnown RBP4.79□□□□□ -1.64
CNN3-206ENST00000487539 SLC9A2Q9UBY0 812 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.79□□□□□ -1.64
CNN3-206ENST00000487539 PCDHB2Q9Y5E7 798 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 UBIAD1Q9Y5Z9 338 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 KNL1Q8NG31 2342 aa4.79□□□□□ -1.64
CNN3-206ENST00000487539 NBASA2RRP1 2371 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 NEDD4P46934 1319 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 TMEM200CA6NKL6 621 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 INO80B-WBP1J3KQ70 363 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 MEIS2O14770 477 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 ZNF185O15231 689 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 HTRA2O43464 458 aaPredicted RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 CYTH3O43739 400 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 GJB3O75712 270 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 ONECUT2O95948 504 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 CFIP05156 583 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 PARP1P09874 1014 aaKnown RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 SEMG2Q02383 582 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 DSC1Q08554 894 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 LMAN2Q12907 356 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 MYO1EQ12965 1108 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 BEAN1Q3B7T3 259 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 USP41Q3LFD5 358 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 SPDYE7PQ495Y7 208 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 ZNF484Q5JVG2 852 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 STXBP5Q5T5C0 1151 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 LIN9Q5TKA1 542 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 METRNLQ641Q3 311 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 SWSAP1Q6NVH7 229 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 MRPL10Q7Z7H8 261 aaKnown RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 ZBTB46Q86UZ6 589 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 CEP57Q86XR8 500 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 HDDC3Q8N4P3 179 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 OR56A1Q8NGH5 318 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 CSGALNACT1Q8TDX6 532 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 SMARCD2Q92925 531 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 KIF1BPQ96EK5 621 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 TMX3Q96JJ7 454 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 TTC14Q96N46 770 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 GAD1Q99259 594 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 NUSAP1Q9BXS6 441 aaKnown RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 INO80BQ9C086 356 aaPredicted RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 C11orf54Q9H0W9 315 aaPredicted RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 CXCL16Q9H2A7 254 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 C8orf33Q9H7E9 229 aaPredicted RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 CPNE5Q9HCH3 593 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 DACT1Q9NYF0 836 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 SLC23A1Q9UHI7 598 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 MAD2L2Q9UI95 211 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 PIN4Q9Y237 131 aaKnown RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 RUVBL1Q9Y265 456 aaKnown RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 SSX2IPQ9Y2D8 614 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 HES2Q9Y543 173 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 IPPQ9Y573 584 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 HS3ST4Q9Y661 456 aa4.78□□□□□ -1.64
CNN3-206ENST00000487539 CFAP20Q9Y6A4 193 aaKnown RBP4.78□□□□□ -1.64
CNN3-206ENST00000487539 FBN3Q75N90 2809 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 A0A087WZ62 844 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 CCDC154A6NI56 674 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 KLRF2D3W0D1 207 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 DTNBO60941 627 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 NDUFA10O95299 355 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 SEC24AO95486 1093 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 C1RP00736 705 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 FGAP02671 866 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 MTHFD1P11586 935 aaKnown RBP4.77□□□□□ -1.65
CNN3-206ENST00000487539 PTPN2P17706 415 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 GCSHP23434 173 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 DDX6P26196 483 aaKnown RBP eCLIP4.77□□□□□ -1.65
CNN3-206ENST00000487539 HOXA9P31269 272 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 OR1D2P34982 312 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 TLE3Q04726 772 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 CCDC173Q0VFZ6 552 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 TEAD2Q15562 447 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 MAPK6Q16659 721 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 UBE2SQ16763 222 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 ASPRV1Q53RT3 343 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 TMEM196Q5HYL7 178 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
CNN3-206ENST00000487539 FAM43BQ6ZT52 329 aaPredicted RBP4.77□□□□□ -1.65
CNN3-206ENST00000487539 TTC7BQ86TV6 843 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms