RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 MRGPRX3Q96LB0 322 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 ZNF578Q96N58 590 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 TKTL2Q9H0I9 626 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 SIK2Q9H0K1 926 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 WDCPQ9H6R7 721 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 EBF2Q9HAK2 575 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 PRSS16Q9NQE7 514 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 METTL5Q9NRN9 209 aaKnown RBP6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 ARHGEF38Q9NXL2 777 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 TMEM59LQ9UK28 342 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 VANGL2Q9ULK5 521 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 CLCA2Q9UQC9 943 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 ERVW-1Q9UQF0 538 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 HS3ST4Q9Y661 456 aa6.6□□□□□ -1.35
CTDSPL-208ENST00000486978 LRRK1Q38SD2 2015 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 EDDM13A0A1B0GTR0 161 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 TARSL2A2RTX5 802 aaKnown RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 TTC34A8MYJ7 566 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CASC3O15234 703 aaKnown RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 SIN3BO75182 1162 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CLDN11O75508 207 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 MT-CO3P00414 261 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 DNTTP04053 509 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 C1SP09871 688 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CCDC172P0C7W6 258 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 RNF224P0DH78 156 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 UNGP13051 313 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 PDGFRAP16234 1089 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 GGCXP38435 758 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 NNMTP40261 264 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 NSFP46459 744 aaKnown RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ZNF165P49910 485 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 IRAK1P51617 712 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 PLK1P53350 603 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CDH4P55283 916 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 GSCP56915 257 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 RIPPLY3P57055 190 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 RPS14P62263 151 aaKnown RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 GABREP78334 506 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 SULT2A1Q06520 285 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 SKIDA1Q1XH10 827 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CLEC16AQ2KHT3 1053 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 KLHL40Q2TBA0 621 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ARL13BQ3SXY8 428 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 TTC31Q49AM3 519 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 C5orf22Q49AR2 442 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 FILIP1LQ4L180 1135 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 TRNP1Q6NT89 227 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 LRRC31Q6UY01 552 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 BNIPLQ7Z465 357 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 C14orf80Q86SX3 495 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ZNF683Q8IZ20 524 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 EMC1Q8N766 993 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 SLC30A5Q8TAD4 765 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 BIRC7Q96CA5 298 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 PRR11Q96HE9 360 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 CFAP57Q96MR6 1250 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 PPP1R9BQ96SB3 815 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 PCDHB18PQ96TA0 734 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 C11orf70Q9BRQ4 267 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 FUCA2Q9BTY2 467 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 NUP58Q9BVL2 599 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 DPH1Q9BZG8 443 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 PCED1AQ9H1Q7 454 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 RSPH9Q9H1X1 276 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 EPN3Q9H201 632 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 MTG2Q9H4K7 406 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ZNF768Q9H5H4 540 aaKnown RBP6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 ANLNQ9NQW6 1124 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 MYO6Q9UM54 1294 aa6.59□□□□□ -1.35
CTDSPL-208ENST00000486978 APCP25054 2843 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 FBN3Q75N90 2809 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 IGLV3-10A0A075B6K4 115 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 DRGXA6NNA5 263 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 I6L893 689 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 TEX33O43247 280 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 RNASEH1O60930 286 aaKnown RBP6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 DXOO77932 396 aaKnown RBP6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 CNTN5O94779 1100 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 ENDOD1O94919 500 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 CALB1P05937 261 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 FERP16591 822 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 PTMSP20962 102 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 COL8A1P27658 744 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 SDC4P31431 198 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 PTPN9P43378 593 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 GRIA4P48058 902 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 NUMBP49757 651 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 STK19P49842 368 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 ATP11AP98196 1134 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 PTP4A2Q12974 167 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 IQCB1Q15051 598 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 C9orf64Q5T6V5 341 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 CDCP2Q5VXM1 449 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 ZNF787Q6DD87 383 aa6.58□□□□□ -1.36
CTDSPL-208ENST00000486978 USP30Q70CQ3 517 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms