RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 A6NNZ2 444 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 TRIM38O00635 465 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 SIGLEC6O43699 453 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 PIAS2O75928 621 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 PCDH8O95206 1070 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 GSRP00390 522 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 UNGP13051 313 aaPredicted RBP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 ADRB3P13945 408 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 PRLRP16471 622 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 SDC4P31431 198 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 STAT1P42224 750 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 POLR2FP61218 127 aaKnown RBP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 ATP11AP98196 1134 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 PTP4A2Q12974 167 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 TARDBPQ13148 414 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 KYAT3Q6YP21 454 aaKnown RBP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 RBM43Q6ZSC3 357 aaKnown RBP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 EMC1Q8N766 993 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 GRIN3AQ8TCU5 1115 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 HNRNPLLQ8WVV9 542 aaKnown RBP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 ARHGEF2Q92974 986 aaKnown RBP11.68□□□□□ -0.54
SCFD1-206ENST00000484733 NTAN1Q96AB6 310 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 BMFQ96LC9 184 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 SLC17A9Q9BYT1 436 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 VPS16Q9H269 839 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 USP29Q9HBJ7 922 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 LMBRD1Q9NUN5 540 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
SCFD1-206ENST00000484733 ZZEF1O43149 2961 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
SCFD1-206ENST00000484733 GIMD1P0DJR0 217 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 CCNHP51946 323 aaPredicted RBP11.67□□□□□ -0.54
SCFD1-206ENST00000484733 FKBP15Q5T1M5 1219 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 SEL1L3Q68CR1 1132 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 DCBLD1Q8N8Z6 715 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 FAM181AQ8N9Y4 354 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 MYLKQ15746 1914 aa11.67□□□□□ -0.54
SCFD1-206ENST00000484733 TSPAN6O43657 245 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 ACVRL1P37023 503 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 INSM1Q01101 510 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 FGL2Q14314 439 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 C15orf59Q2T9L4 293 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 RAB6CQ53S08 254 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 HS1BP3Q53T59 392 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 Q6ZSR6 202 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 PHF13Q86YI8 300 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 SLC22A18ASQ8N1D0 253 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 TBC1D31Q96DN5 1066 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 C1QTNF2Q9BXJ5 285 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 RAB6CQ9H0N0 254 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 FZD3Q9NPG1 666 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 NLGN3Q9NZ94 848 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 HECAQ9UBI9 543 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 FCF1Q9Y324 198 aaKnown RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 ARID1BQ8NFD5 2236 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 KDELR3O43731 214 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 SDC3O75056 442 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 PLEKP08567 350 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 ALPPL2P10696 532 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 CKMT1AP12532 417 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 KLK7P49862 253 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 SOWAHCQ53LP3 525 aaPredicted RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 ZNF805Q5CZA5 627 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 PARS2Q7L3T8 475 aaKnown RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 DENND6BQ8NEG7 585 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 CASKIN2Q8WXE0 1202 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 VOPP1Q96AW1 172 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 PCDHB18PQ96TA0 734 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 C11orf70Q9BRQ4 267 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 NDFIP2Q9NV92 336 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 UCKL1Q9NWZ5 548 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 LIMA1Q9UHB6 759 aaKnown RBP11.66□□□□□ -0.54
SCFD1-206ENST00000484733 HPCAL4Q9UM19 191 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 CSNK1G3Q9Y6M4 447 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 DMXL2Q8TDJ6 3036 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 ASPMQ8IZT6 3477 aa11.66□□□□□ -0.54
SCFD1-206ENST00000484733 SPEGQ15772 3267 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 NEMP2A6NFY4 417 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 ZSCAN5CA6NGD5 496 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 C16orf96A6NNT2 1141 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FAM72CH0Y354 149 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 SCAMP1O15126 338 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 EPHB6O15197 1021 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 LRIG2O94898 1065 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 POP4O95707 220 aaKnown RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CALB1P05937 261 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 KRT3P12035 628 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 RABIFP47224 123 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 DNA2P51530 1060 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 HDAC4P56524 1084 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CLDN6P56747 220 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CLDN2P57739 230 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 HNRNPKP61978 463 aaKnown RBP eCLIP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 SNRPD1P62314 119 aaKnown RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 COL9A2Q14055 689 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CDO1Q16878 200 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms