RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 MCAMP43121 646 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MAD2L1Q13257 205 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SSX2Q16385 188 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ARCQ7LC44 396 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 FBXO33Q7Z6M2 555 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 S100A13Q99584 98 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SPON2Q9BUD6 331 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MRPL4Q9BYD3 311 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 GRIP1Q9Y3R0 1128 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MAU2Q9Y6X3 613 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ERI2A8K979 691 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ZNF234Q14588 700 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 UAP1L1Q3KQV9 507 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 RNF219Q5W0B1 726 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SEC14L1Q92503 715 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 NMRAL1Q9HBL8 299 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SPON1Q9HCB6 807 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 RPS6KA6Q9UK32 745 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 WDR27A2RRH5 827 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 IL32P24001 234 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SCNN1DP51172 638 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ANKDD1AQ495B1 522 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 FAM76BQ5HYJ3 339 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ETNPPLQ8TBG4 499 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 RBM4BQ9BQ04 359 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 HEPHQ9BQS7 1158 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MECRQ9BV79 373 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 RBM4Q9BWF3 364 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 RGL2O15211 777 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 TP73O15350 636 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MZF1P28698 734 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MARSP56192 900 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 BST1Q10588 318 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ADGRE1Q14246 886 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SNAPC1Q16533 368 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CCNYL2Q5T2Q4 361 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 BRSK2Q8IWQ3 736 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PIH1D2Q8WWB5 315 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CAMKK2Q96RR4 588 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 POLR3FQ9H1D9 316 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CPVLQ9H3G5 476 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SLC39A1Q9NY26 324 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ARHGEF40Q8TER5 1519 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 A0A096LPK6 155 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 FABP12A6NFH5 140 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 TRDMT1O14717 391 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PRMT3O60678 531 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PMPCBO75439 489 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CAMK1Q14012 370 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PROSER3Q2NL68 480 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PPP1R18Q6NYC8 613 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CORO1BQ9BR76 489 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 UBP1Q9NZI7 540 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 A0A0J9YVX5 310 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 AP3D1O14617 1153 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 LTFP02788 710 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MOGQ16653 247 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CRTC1Q6UUV9 634 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 ADCK2Q7Z695 626 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 TRIM43Q96BQ3 446 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 FRMD6Q96NE9 622 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 GDAP2Q9NXN4 497 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 AP3M1Q9Y2T2 418 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 TTC37Q6PGP7 1564 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CD2P06729 351 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MAN2A2P49641 1150 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 AP3S2P59780 193 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MCCD1P59942 119 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 XKRXQ6PP77 449 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PABPC5Q96DU9 382 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 C1GALT1C1Q96EU7 318 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 NMUR2Q9GZQ4 415 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 MAB21L2Q9Y586 359 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 IFRD1O00458 451 aaPredicted RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 NARSO43776 548 aaKnown RBP10.36□□□□□ -0.75
COL12A1-207ENST00000483888 TSPAN1O60635 241 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 NAT1P18440 290 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 CDK8P49336 464 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PSMC5P62195 406 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 PTCHD4Q6ZW05 846 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 TRIM62Q9BVG3 475 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 OR2AT4A6NND4 320 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 AKAP8O43823 692 aaKnown RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 DCDC1P59894 354 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 YWHAZP63104 245 aaKnown RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 CCNA1P78396 465 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 WSCD2Q2TBF2 565 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 ACSBG2Q5FVE4 666 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 OXR1Q8N573 874 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 OR2T34Q8NGX1 318 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 OR2T3Q8NH03 318 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 BLOC1S5Q8TDH9 187 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SCAF8Q9UPN6 1271 aaKnown RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 SAMHD1Q9Y3Z3 626 aaKnown RBP10.35□□□□□ -0.75
COL12A1-207ENST00000483888 PLB1Q6P1J6 1458 aa10.35□□□□□ -0.75
COL12A1-207ENST00000483888 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms