RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ACO1P21399 889 aaKnown RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PSMC2P35998 433 aaKnown RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PIK3CAP42336 1068 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PTGER3P43115 390 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SYKP43405 635 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ATXN3P54252 364 aaPredicted RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 KDSRQ06136 332 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 GFPT1Q06210 699 aaPredicted RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ZNF33AQ06730 810 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SEMA3BQ13214 749 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SLC14A1Q13336 389 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ADAM9Q13443 819 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SCARA5Q6ZMJ2 495 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PIP4P1Q86T03 277 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SFTPA1Q8IWL2 248 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 CHPFQ8IZ52 775 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ARHGAP18Q8N392 663 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 GUF1Q8N442 669 aaKnown RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 HDDC3Q8N4P3 179 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 C12orf29Q8N999 325 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 IPO4Q8TEX9 1081 aaKnown RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 UCMAQ8WVF2 138 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PTCHD1Q96NR3 888 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SPON2Q9BUD6 331 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 DUSP16Q9BY84 665 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 SLC2A11Q9BYW1 496 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ZDHHC5Q9C0B5 715 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 CAPN10Q9HC96 672 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 CD248Q9HCU0 757 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 TMEM74BQ9NUR3 256 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 DNAJC17Q9NVM6 304 aaKnown RBP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
LRCH3-216ENST00000481048 HPSEQ9Y251 543 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ATP6V1DQ9Y5K8 247 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PTPRBP23467 1997 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 ATRXP46100 2492 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 APC2O95996 2303 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 PLXNB3Q9ULL4 1909 aa6.76□□□□□ -1.33
LRCH3-216ENST00000481048 FASNP49327 2511 aaKnown RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 IGHV1OR15-9A0A0B4J2B8 117 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 FAM221BA6H8Z2 402 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 ANTXRLA6NF34 631 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 STX10O60499 249 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 OPHN1O60890 802 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 NDUFS2O75306 463 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 STC2O76061 302 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 TBX18O95935 607 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 PENKP01210 267 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 CCDC130P13994 396 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 GNSP15586 552 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 PFKFB1P16118 471 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 NR2F2P24468 414 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 MC3RP41968 323 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 SLC8A3P57103 927 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 CORO7P57737 925 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 KRT85P78386 507 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 ENPP2Q13822 863 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 STARD3Q14849 445 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 EIF4HQ15056 248 aaKnown RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 EDRF1Q3B7T1 1238 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 UAP1L1Q3KQV9 507 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 RAB41Q5JT25 222 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 WDR45BQ5MNZ6 344 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 C10orf120Q5SQS8 335 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 C1orf220Q5T0J3 134 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 KRT39Q6A163 491 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 UNQ6494/PRO21346Q6UXR6 183 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 TPGS1Q6ZTW0 290 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 GRAMD1CQ8IYS0 662 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 CPXM2Q8N436 756 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 ANKRD52Q8NB46 1076 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 CADM4Q8NFZ8 388 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 SCAND2PQ9GZW5 306 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 TMEM8AQ9HCN3 771 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 FAM49BQ9NUQ9 324 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 OSER1Q9NX31 292 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 CALCOCO1Q9P1Z2 691 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 THAP10Q9P2Z0 257 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 STRIP2Q9ULQ0 834 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 SF3B6Q9Y3B4 125 aaKnown RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 MSRB2Q9Y3D2 182 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 NEUROG3Q9Y4Z2 214 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
LRCH3-216ENST00000481048 ANKRD11Q6UB99 2663 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-216ENST00000481048 CFAP47Q6ZTR5 3102 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 A0A1B0GVL5 298 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 A0A1W2PQH9 124 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 SH3D21A4FU49 640 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 PRRT4C9JH25 899 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 SCAMP3O14828 347 aaKnown RBP6.74□□□□□ -1.33
LRCH3-216ENST00000481048 CFIP05156 583 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 CD3EP07766 207 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 IRF1P10914 325 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 IMPDH2P12268 514 aa6.74□□□□□ -1.33
LRCH3-216ENST00000481048 IFNGR1P15260 489 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms