RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 BORAQ6PGQ7 559 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CPNE9Q8IYJ1 553 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM151AQ8N4L1 468 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 PCDH20Q8N6Y1 951 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 SHCBP1Q8NEM2 672 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 DDI1Q8WTU0 396 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 LRTOMTQ8WZ04 291 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CPNE1Q99829 537 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 UNKQ9C0B0 810 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 OXSMQ9NWU1 459 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CCDC78A2IDD5 438 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 TCAF2A6NFQ2 919 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 TMX2-CTNND1H3BSU7 103 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 FOXD2O60548 495 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 VAPBO95292 243 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 NR2C2P49116 596 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 SULT1E1P49888 294 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 LIMK2P53671 638 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 NAGLUP54802 743 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 ART3Q13508 389 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 KYAT1Q16773 422 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 DUSP28Q4G0W2 176 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM126BQ8IUX1 230 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF567Q8N184 647 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 TRIML2Q8N7C3 387 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CCNYQ8ND76 341 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CATSPER1Q8NEC5 780 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 FAM110BQ8TC76 370 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 URGCPQ8TCY9 931 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 IRGQQ8WZA9 623 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 EMID1Q96A84 441 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 ZFP42Q96MM3 310 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 C20orf96Q9NUD7 363 aaPredicted RBP13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 VPS28Q9UK41 221 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 BLOC1S6Q9UL45 172 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 FZD10Q9ULW2 581 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 SNX10Q9Y5X0 201 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 CROCCQ5TZA2 2017 aa13.51□□□□□ -0.25
PDZRN3-208ENST00000479530 SMIM10L2AP0DMW4 78 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 SMIM10L2BP0DMW5 78 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 HDCP19113 662 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 RPL14P50914 215 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 BCAT1P54687 386 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 GPR142Q7Z601 462 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 CRYBG2Q8N1P7 616 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 SNX31Q8N9S9 440 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ISL2Q96A47 359 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ZBTB26Q9HCK0 441 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM30AQ9NV96 361 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ADA2Q9NZK5 511 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 TIMM13Q9Y5L4 95 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 COPG1Q9Y678 874 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 NRP1O14786 923 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 TREHO43280 583 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 CYP2C9P11712 490 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 DARSP14868 501 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF23P17027 643 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 GARSP41250 739 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 CTBSQ01459 385 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 PLOD1Q02809 727 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 SULT2A1Q06520 285 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 DGKDQ16760 1214 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 LDLRAD1Q5T700 205 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 LPCAT2Q7L5N7 544 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 SPATA6LQ8N4H0 392 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 LRRC52Q8N7C0 313 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 BRI3BPQ8WY22 251 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ACE2Q9BYF1 805 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 SNX25Q9H3E2 840 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 PIGVQ9NUD9 493 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 OLAHQ9NV23 265 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ARHGEF38Q9NXL2 777 aa13.5□□□□□ -0.25
PDZRN3-208ENST00000479530 ZCWPW2A0A1B0GU75 182 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ARHGEF37A1IGU5 675 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 PHGDHO43175 533 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 EPHX2P34913 555 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 SPRP35270 261 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 RALGDSQ12967 914 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 IKBKEQ14164 716 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 UBXN11Q5T124 520 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 POTEHQ6S545 545 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 UNC93AQ86WB7 457 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms