RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 FAM72AQ5TYM5 149 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 FAM72DQ6L9T8 149 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 KANSL1Q7Z3B3 1105 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 NLRP14Q86W24 1093 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 FAM72BQ86X60 149 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 CCDC185Q8N715 623 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 SELENOOQ9BVL4 669 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 MAGEB5Q9BZ81 275 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 RETREG1Q9H6L5 497 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 FZD3Q9NPG1 666 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 SEPT11Q9NVA2 429 aaKnown RBP22.98■■□□□ 1.27
C9orf3-213ENST00000471978 TMEM248Q9NWD8 314 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 DNAI1Q9UI46 699 aa22.98■■□□□ 1.27
C9orf3-213ENST00000471978 ZFR2Q9UPR6 939 aaKnown RBP22.98■■□□□ 1.27
C9orf3-213ENST00000471978 GOLGA4Q13439 2230 aaKnown RBP22.98■■□□□ 1.27
C9orf3-213ENST00000471978 TRABD2BA6NFA1 517 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 SDC3O75056 442 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 RFPL3O75679 317 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 LRIG2O94898 1065 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 CD160O95971 181 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 CALB1P05937 261 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 PLEKP08567 350 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 C1SP09871 688 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 HNRNPA2B1P22626 353 aaKnown RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 ITGB7P26010 798 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 CCNHP51946 323 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 NEK3P51956 506 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 GSCP56915 257 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 CAMK2BQ13554 666 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 SEL1L3Q68CR1 1132 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 TMPRSS12Q86WS5 348 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 PHF13Q86YI8 300 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 ARHGEF2Q92974 986 aaKnown RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 TBC1D31Q96DN5 1066 aa22.97■■□□□ 1.27
C9orf3-213ENST00000471978 HECAQ9UBI9 543 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-213ENST00000471978 CXorf51AA0A1B0GTR3 108 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 GOLGA6L22H0YM25 854 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 CDK4P11802 303 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 ADRB3P13945 408 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 GPD1P21695 349 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 L1CAMP32004 1257 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 ACADVLP49748 655 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 FBXL19Q6PCT2 694 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 WDR59Q6PJI9 974 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 C3orf20Q8ND61 904 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 TSC1Q92574 1164 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 ISG20Q96AZ6 181 aaKnown RBP22.96■■□□□ 1.27
C9orf3-213ENST00000471978 TM6SF2Q9BZW4 377 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 MAGEH1Q9H213 219 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 ZDHHC6Q9H6R6 413 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 HPCAL4Q9UM19 191 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 LHX6Q9UPM6 363 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 NEU3Q9UQ49 428 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 APC2O95996 2303 aa22.96■■□□□ 1.27
C9orf3-213ENST00000471978 LRRC10BA6NIK2 292 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 GEMIN4P57678 1058 aaKnown RBP22.95■■□□□ 1.26
C9orf3-213ENST00000471978 CYP4F3Q08477 520 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 TMEM259Q4ZIN3 620 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 RYBPQ8N488 228 aaPredicted RBP22.95■■□□□ 1.26
C9orf3-213ENST00000471978 PDCD7Q8N8D1 485 aaKnown RBP22.95■■□□□ 1.26
C9orf3-213ENST00000471978 NTAN1Q96AB6 310 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 ERGIC2Q96RQ1 377 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 AGPAT1Q99943 283 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 CALN1Q9BXU9 219 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 KLHL11Q9NVR0 708 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 DKK4Q9UBT3 224 aa22.95■■□□□ 1.26
C9orf3-213ENST00000471978 ACACAQ13085 2346 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 SIGLEC16A6NMB1 481 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 RAMP2O60895 175 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 JUPP14923 745 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 CLDN2P57739 230 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 RPS21P63220 83 aaKnown RBP22.94■■□□□ 1.26
C9orf3-213ENST00000471978 MAPK8IP2Q13387 824 aaPredicted RBP22.94■■□□□ 1.26
C9orf3-213ENST00000471978 KIAA1161Q6NSJ0 714 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 LEKR1Q6ZMV7 388 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 GCNT7Q6ZNI0 430 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 MON1BQ7L1V2 547 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 PARS2Q7L3T8 475 aaKnown RBP22.94■■□□□ 1.26
C9orf3-213ENST00000471978 SLFN11Q7Z7L1 901 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 PLPP6Q8IY26 295 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 OR13H1Q8NG92 308 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 FEM1CQ96JP0 617 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 SLC17A9Q9BYT1 436 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 RAXQ9Y2V3 346 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 GPSM3Q9Y4H4 160 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 FADS3Q9Y5Q0 445 aa22.94■■□□□ 1.26
C9orf3-213ENST00000471978 CKMT2P17540 419 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 GKP32189 559 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 HNF1BP35680 557 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 CLDN6P56747 220 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 C1QBPQ07021 282 aaKnown RBP22.93■■□□□ 1.26
C9orf3-213ENST00000471978 NCAPHQ15003 741 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 POLD3Q15054 466 aaPredicted RBP22.93■■□□□ 1.26
C9orf3-213ENST00000471978 DNAJC24Q6P3W2 148 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 SCYL2Q6P3W7 929 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 APTXQ7Z2E3 356 aaKnown RBP22.93■■□□□ 1.26
C9orf3-213ENST00000471978 ABI3BPQ7Z7G0 1075 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 PYROXD2Q8N2H3 581 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 SLC25A45Q8N413 288 aa22.93■■□□□ 1.26
C9orf3-213ENST00000471978 OR6K2Q8NGY2 324 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms