RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 CETN1Q12798 172 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 EIF2B5Q13144 721 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 MTA1Q13330 715 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 PDCLQ13371 301 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 PNOCQ13519 176 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 MEA1Q16626 185 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 C5orf22Q49AR2 442 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 ALFQ53S48 1182 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 COBLL1Q53SF7 1204 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 COLEC12Q5KU26 742 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 ZNF658Q5TYW1 1059 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 C22orf39Q6P5X5 142 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 DPY19L3Q6ZPD9 716 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 SLC35F3Q8IY50 421 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 PPP1R16AQ96I34 528 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 KLF6Q99612 283 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 TRPM6Q9BX84 2022 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 FADS3Q9Y5Q0 445 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
TRAPPC12-216ENST00000469400 BOD1L1Q8NFC6 3051 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 UBR5O95071 2799 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 A0A0D9SEW6 157 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 A0A1W2PQ27 194 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 A0A1W2PQ64 194 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 FPGTO14772 594 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 P4HA2O15460 535 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 MED7O43513 233 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 NOBOXO60393 691 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 GCATO75600 419 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 GRAP2O75791 330 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 RHOCP08134 193 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 GLI1P08151 1106 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SLC5A2P31639 672 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 NME3Q13232 169 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SGCGQ13326 291 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SPIDRQ14159 915 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 ATG14Q6ZNE5 492 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 USP53Q70EK8 1073 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 RBFAQ8N0V3 343 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 DCAF4L2Q8NA75 395 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 WDR48Q8TAF3 677 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 EXTL1Q92935 676 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 GLMNQ92990 594 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 NAT6Q93015 286 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SGF29Q96ES7 293 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 CCDC3Q9BQI4 270 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 ARHGAP9Q9BRR9 750 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 C1QTNF2Q9BXJ5 285 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SIK2Q9H0K1 926 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SYNDIG1Q9H7V2 258 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 SPASTQ9UBP0 616 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 PCDHGA7Q9Y5G6 932 aa13.08□□□□□ -0.32
TRAPPC12-216ENST00000469400 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 IGLON5A6NGN9 336 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 PLD2O14939 933 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 THAP12O43422 761 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 SUV39H1O43463 412 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 HSF2BPO75031 334 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 ITGB2P05107 769 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 ITGB6P18564 788 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 ITGB7P26010 798 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 L1CAMP32004 1257 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 PFN3P60673 137 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 SRSF6Q13247 344 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 C1orf61Q13536 156 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 TGIF1Q15583 401 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 PRRT3Q5FWE3 981 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 SETD3Q86TU7 594 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 BTN2A2Q8WVV5 523 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 LIN37Q96GY3 246 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 CCDC34Q96HJ3 373 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 CPXM1Q96SM3 734 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 APOBEC3BQ9UH17 382 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 PADI4Q9UM07 663 aa13.07□□□□□ -0.32
TRAPPC12-216ENST00000469400 LMO7DNF2Z398 122 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 AP1G1O43747 822 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 ANXA6P08133 673 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 FAM87AP0C7U9 286 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 GNA15P30679 374 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 UGT1A5P35504 534 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 PARS2Q7L3T8 475 aaKnown RBP13.06□□□□□ -0.32
TRAPPC12-216ENST00000469400 RAB11FIP2Q7L804 512 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms