RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ACVRL1P37023 503 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 GABRB2P47870 512 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 C19orf57Q0VDD7 668 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 BECN1Q14457 450 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 SLC25A52Q3SY17 297 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 CARD16Q5EG05 197 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 CRTC1Q6UUV9 634 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 GPR155Q7Z3F1 870 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 DRC7Q8IY82 874 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 EMC1Q8N766 993 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 DCAF4L2Q8NA75 395 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 TMEM35BQ8NCS4 154 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 CPA5Q8WXQ8 436 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 BAP1Q92560 729 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 VOPP1Q96AW1 172 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 PGAP3Q96FM1 320 aaPredicted RBP12.51□□□□□ -0.41
HDAC3-204ENST00000469207 HEPHQ9BQS7 1158 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 TM6SF2Q9BZW4 377 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 TCEAL2Q9H3H9 227 aaPredicted RBP12.51□□□□□ -0.41
HDAC3-204ENST00000469207 CPNE5Q9HCH3 593 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 ATP13A1Q9HD20 1204 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
HDAC3-204ENST00000469207 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 ITM2BQ9Y287 266 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 FHOD1Q9Y613 1164 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 HS3ST3A1Q9Y663 406 aa12.51□□□□□ -0.41
HDAC3-204ENST00000469207 TRPM6Q9BX84 2022 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 PTPRQQ9UMZ3 2332 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 A0A1W2PNU3 283 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 ILVBLA1L0T0 632 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 CPED1A4D0V7 1026 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 GTPBP10A4D1E9 387 aaKnown RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 FAM72CH0Y354 149 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 SCAMP1O15126 338 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 CSO75390 466 aaKnown RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 GJB6O95452 261 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 MMEP08473 750 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 L1CAMP32004 1257 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 CDH5P33151 784 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 ABL2P42684 1182 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 RECQLP46063 649 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 CCNHP51946 323 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 NEK3P51956 506 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 SNX16P57768 344 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 GABREP78334 506 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 ATP11AP98196 1134 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 CDKN3Q16667 212 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 LRRC73Q5JTD7 316 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 MIIPQ5JXC2 388 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 FAM72AQ5TYM5 149 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 FAM72DQ6L9T8 149 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 PARS2Q7L3T8 475 aaKnown RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 BNIPLQ7Z465 357 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 NOP9Q86U38 636 aaKnown RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 FAM72BQ86X60 149 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 ZDHHC17Q8IUH5 632 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 RYBPQ8N488 228 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 IFI44Q8TCB0 444 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 FEM1CQ96JP0 617 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 LGMNQ99538 433 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 KLF6Q99612 283 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 ABCG4Q9H172 646 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 NDST4Q9H3R1 872 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 ZDHHC6Q9H6R6 413 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 RRN3Q9NYV6 651 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 NLGN3Q9NZ94 848 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 HECAQ9UBI9 543 aaPredicted RBP12.5□□□□□ -0.41
HDAC3-204ENST00000469207 TMEM59LQ9UK28 342 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
HDAC3-204ENST00000469207 A6NNZ2 444 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 F9P00740 461 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 CSF2P04141 144 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 KRT10P13645 584 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 SERPINH1P50454 418 aaKnown RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 CLCN6P51797 869 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 RPS21P63220 83 aaKnown RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 GNA12Q03113 381 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 CCDC15Q0P6D6 951 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 EIF2B5Q13144 721 aaKnown RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 MTA1Q13330 715 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 C1orf61Q13536 156 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 PDE1CQ14123 709 aaPredicted RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 MAN2A1Q16706 1144 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 CDO1Q16878 200 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 TPD52L1Q16890 204 aaPredicted RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
HDAC3-204ENST00000469207 DEFB133Q30KQ1 61 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 ARHGAP40Q5TG30 622 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 KLHDC7AQ5VTJ3 777 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 GUSBP11Q6P575 273 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 RBFAQ8N0V3 343 aa12.49□□□□□ -0.41
HDAC3-204ENST00000469207 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms