RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF599Q96NL3 588 aa13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 CSPG4P5Q96PW8 444 aa13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 PDFQ9HBH1 243 aa13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 CAPN10Q9HC96 672 aa13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 DYRK4Q9NR20 520 aa13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 UBA2Q9UBT2 640 aaPredicted RBP13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 MFHAS1Q9Y4C4 1052 aa13.3□□□□□ -0.28
R3HDM1-213ENST00000463230 A0A0A6YYK5 440 aaPredicted RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 POP4O95707 220 aaKnown RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SYPP08247 313 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ITGB7P26010 798 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ARSEP51690 589 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ADPRHP54922 357 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 RAD51Q06609 339 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 IL10RBQ08334 325 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 TMCO3Q6UWJ1 677 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ZNF354CQ86Y25 554 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 RGL4Q8IZJ4 473 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ZNF670Q9BS34 389 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 C6orf106Q9H6K1 298 aaPredicted RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 TMEM74BQ9NUR3 256 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 FCF1Q9Y324 198 aaKnown RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 TMCC1O94876 653 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 IPO7O95373 1038 aaKnown RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 IGSF6O95976 241 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 TCF4P15884 667 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SSR1P43307 286 aaKnown RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 MAGEA1P43355 309 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ID4P47928 161 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 CCNHP51946 323 aaPredicted RBP13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SMTNL2Q2TAL5 461 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 KCNT1Q5JUK3 1230 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 TRIM69Q86WT6 500 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 ARHGAP12Q8IWW6 846 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 DEFB119Q8N690 84 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 EDEM2Q9BV94 578 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 TNKS2Q9H2K2 1166 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SERGEFQ9UGK8 458 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SARDHQ9UL12 918 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 WASF2Q9Y6W5 498 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 PCDH15Q96QU1 1955 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 SDK1Q7Z5N4 2213 aa13.29□□□□□ -0.28
R3HDM1-213ENST00000463230 BCAT2O15382 392 aaPredicted RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CTSLP07711 333 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CSNK1DP48730 415 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 NUMBP49757 651 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 PAPOLAP51003 745 aaKnown RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 SUOXP51687 545 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CDH6P55285 790 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 TEAD4Q15561 434 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 RSPO4Q2I0M5 234 aaPredicted RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 AGBL4Q5VU57 503 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 NCEH1Q6PIU2 408 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CHST14Q8NCH0 376 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 C1orf216Q8TAB5 229 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 RAB7BQ96AH8 199 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 HECAQ9UBI9 543 aaPredicted RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 DMTF1Q9Y222 760 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 PI4KAP42356 2102 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 LNP1A1A4G5 178 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 KPNA3O00505 521 aaPredicted RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 LATO43561 262 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 BNIP3LO60238 219 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 LEFTY1O75610 366 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CFIP05156 583 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 HSPA9P38646 679 aaKnown RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 NEK3P51956 506 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 RHOAP61586 193 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CNTN1Q12860 1018 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 MESDQ14696 234 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CCDC6Q16204 474 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 MYLK3Q32MK0 819 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 ARSIQ5FYB1 569 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 STPG1Q5TH74 334 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 DAB2IPQ5VWQ8 1189 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 OR14C36Q8NHC7 312 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 BIRC7Q96CA5 298 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 CPEB1Q9BZB8 566 aaKnown RBP13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 SP110Q9HB58 689 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 TMEM9BQ9NQ34 198 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 PCDHA13Q9Y5I0 950 aa13.28□□□□□ -0.28
R3HDM1-213ENST00000463230 ATXN2Q99700 1313 aaKnown RBP13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 AP1G1O43747 822 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 IGHV4-34P06331 123 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 DNA2P51530 1060 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 RENBPP51606 427 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 IRX4P78413 519 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 DPYSL3Q14195 570 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 ZNF805Q5CZA5 627 aa13.27□□□□□ -0.28
R3HDM1-213ENST00000463230 PIP5KL1Q5T9C9 394 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms