RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 KLF6Q99612 283 aaPredicted RBP16.02■□□□□ 0.16
SND1-203ENST00000463020 TRIM62Q9BVG3 475 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 HDAC8Q9BY41 377 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 SLC12A6Q9UHW9 1150 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
SND1-203ENST00000463020 SPTY2D1-AS1A0A0U1RR47 76 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 A6NNZ2 444 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 CLDN11O75508 207 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 GCATO75600 419 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 CSF2P04141 144 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 RHOCP08134 193 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 GKP32189 559 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 UCNP55089 124 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 CDH4P55283 916 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 STX17P56962 302 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 EIF2B5Q13144 721 aaKnown RBP16.01■□□□□ 0.15
SND1-203ENST00000463020 CLN3Q13286 438 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 MEA1Q16626 185 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 HS1BP3Q53T59 392 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 FOXR1Q6PIV2 292 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 KYAT3Q6YP21 454 aaKnown RBP16.01■□□□□ 0.15
SND1-203ENST00000463020 PARS2Q7L3T8 475 aaKnown RBP16.01■□□□□ 0.15
SND1-203ENST00000463020 LSMEM2Q8N112 164 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 NELFBQ8WX92 580 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 PPP1R13BQ96KQ4 1090 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 SLC17A9Q9BYT1 436 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 ABCG4Q9H172 646 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 PLCB1Q9NQ66 1216 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 ZNF212Q9UDV6 495 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 IL36AQ9UHA7 158 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 CTNND2Q9UQB3 1225 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 FADS3Q9Y5Q0 445 aa16.01■□□□□ 0.15
SND1-203ENST00000463020 CDRT15L2A8MXV6 281 aa16■□□□□ 0.15
SND1-203ENST00000463020 K7ENP7 123 aa16■□□□□ 0.15
SND1-203ENST00000463020 M0QYT0 321 aa16■□□□□ 0.15
SND1-203ENST00000463020 PSMA7O14818 248 aa16■□□□□ 0.15
SND1-203ENST00000463020 HSF2BPO75031 334 aa16■□□□□ 0.15
SND1-203ENST00000463020 DAB1O75553 588 aa16■□□□□ 0.15
SND1-203ENST00000463020 ZMPSTE24O75844 475 aa16■□□□□ 0.15
SND1-203ENST00000463020 CD160O95971 181 aa16■□□□□ 0.15
SND1-203ENST00000463020 CELA2BP08218 269 aaPredicted RBP16■□□□□ 0.15
SND1-203ENST00000463020 PNMA6AP0CW24 399 aaPredicted RBP16■□□□□ 0.15
SND1-203ENST00000463020 ALPPL2P10696 532 aa16■□□□□ 0.15
SND1-203ENST00000463020 SLC2A3P11169 496 aa16■□□□□ 0.15
SND1-203ENST00000463020 ADRB3P13945 408 aa16■□□□□ 0.15
SND1-203ENST00000463020 ABL2P42684 1182 aa16■□□□□ 0.15
SND1-203ENST00000463020 OXCT1P55809 520 aa16■□□□□ 0.15
SND1-203ENST00000463020 PTPN20Q4JDL3 420 aa16■□□□□ 0.15
SND1-203ENST00000463020 INO80CQ6PI98 192 aaPredicted RBP16■□□□□ 0.15
SND1-203ENST00000463020 IGF2-ASQ6U949 168 aa16■□□□□ 0.15
SND1-203ENST00000463020 EXD3Q8N9H8 876 aa16■□□□□ 0.15
SND1-203ENST00000463020 LMX1AQ8TE12 382 aa16■□□□□ 0.15
SND1-203ENST00000463020 IFT43Q96FT9 208 aa16■□□□□ 0.15
SND1-203ENST00000463020 DHTKD1Q96HY7 919 aaPredicted RBP16■□□□□ 0.15
SND1-203ENST00000463020 DPH1Q9BZG8 443 aa16■□□□□ 0.15
SND1-203ENST00000463020 TKTL2Q9H0I9 626 aa16■□□□□ 0.15
SND1-203ENST00000463020 THSD1Q9NS62 852 aa16■□□□□ 0.15
SND1-203ENST00000463020 ASNSD1Q9NWL6 643 aa16■□□□□ 0.15
SND1-203ENST00000463020 ARHGEF38Q9NXL2 777 aa16■□□□□ 0.15
SND1-203ENST00000463020 PTPN13Q12923 2485 aa16■□□□□ 0.15
SND1-203ENST00000463020 SPTA1P02549 2419 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 RP1P56715 2156 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 IGLON5A6NGN9 336 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 MUSKO15146 869 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 AQP9O43315 295 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 MED7O43513 233 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 SMC2O95347 1197 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 AFPP02771 609 aaKnown RBP15.99■□□□□ 0.15
SND1-203ENST00000463020 PRNPP04156 253 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 SLC9A1P19634 815 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 HNRNPKP61978 463 aaKnown RBP eCLIP15.99■□□□□ 0.151e-6■■■■□ 19.7
SND1-203ENST00000463020 ARF5P84085 180 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 C1orf61Q13536 156 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 PDE1CQ14123 709 aaPredicted RBP15.99■□□□□ 0.15
SND1-203ENST00000463020 ARHGAP44Q17R89 818 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 TRNP1Q6NT89 227 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 ZCCHC8Q6NZY4 707 aaKnown RBP15.99■□□□□ 0.15
SND1-203ENST00000463020 PARGQ86W56 976 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 SLC35F3Q8IY50 421 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 DCAF4L2Q8NA75 395 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 OR6K2Q8NGY2 324 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 NPY6RQ99463 290 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 C2orf49Q9BVC5 232 aaPredicted RBP15.99■□□□□ 0.15
SND1-203ENST00000463020 TRIM4Q9C037 500 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 CLMPQ9H6B4 373 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 FCF1Q9Y324 198 aaKnown RBP15.99■□□□□ 0.15
SND1-203ENST00000463020 HS3ST3A1Q9Y663 406 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 FLNCQ14315 2725 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 TRPM6Q9BX84 2022 aa15.99■□□□□ 0.15
SND1-203ENST00000463020 RELNP78509 3460 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 EME2A4GXA9 379 aaPredicted RBP15.98■□□□□ 0.15
SND1-203ENST00000463020 DRGXA6NNA5 263 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 SLC28A2O43868 658 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 GLI1P08151 1106 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 JUNDP17535 347 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 USP8P40818 1118 aa15.98■□□□□ 0.15
SND1-203ENST00000463020 CXCR3P49682 368 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms