RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 FOXN3O00409 490 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 AP1G1O43747 822 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 GADD45BO75293 160 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 CSO75390 466 aaKnown RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 ADRB3P13945 408 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 NME1P15531 152 aaKnown RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 TGM2P21980 687 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 ITGB7P26010 798 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 FLT3P36888 993 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 SCNN1AP37088 669 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 LSSP48449 732 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 SERPINH1P50454 418 aaKnown RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 PDX1P52945 283 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 PCBP4P57723 403 aaKnown RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 ERVPABLB-1P60509 514 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 GABREP78334 506 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 PARS2Q7L3T8 475 aaKnown RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 TFAP2DQ7Z6R9 452 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 ZNF605Q86T29 641 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 XYLT1Q86Y38 959 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 ZDHHC17Q8IUH5 632 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 FAM71AQ8IYT1 594 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 GRIN3AQ8TCU5 1115 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 TTC9Q92623 222 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 LENG8Q96PV6 779 aaPredicted RBP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 DEPDC7Q96QD5 511 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 SLC17A9Q9BYT1 436 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 CEP44Q9C0F1 390 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 WDCPQ9H6R7 721 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 POLR1BQ9H9Y6 1135 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 USP29Q9HBJ7 922 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 CPNE5Q9HCH3 593 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 RRN3Q9NYV6 651 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTPN7-204ENST00000462815 RWDD2AQ9UIY3 292 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 TMEM59LQ9UK28 342 aa11.39□□□□□ -0.59
PTPN7-204ENST00000462815 MYO18BQ8IUG5 2567 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 MAST4O15021 2626 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 ILVBLA1L0T0 632 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 USP12O75317 370 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 L1CAMP32004 1257 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 USP8P40818 1118 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 ABL2P42684 1182 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 SULT1E1P49888 294 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 NEK3P51956 506 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 PFN3P60673 137 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 CFHR1Q03591 330 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 EIF2B5Q13144 721 aaKnown RBP11.38□□□□□ -0.59
PTPN7-204ENST00000462815 EXOC3L4Q17RC7 722 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 ISXQ2M1V0 245 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 SLC25A52Q3SY17 297 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 RAB6CQ53S08 254 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 MANEALQ5VSG8 457 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 KIAA1161Q6NSJ0 714 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 GUSBP11Q6P575 273 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 ZNF783Q6ZMS7 281 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 GBP6Q6ZN66 633 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 PTAR1Q7Z6K3 402 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-204ENST00000462815 DCP2Q8IU60 420 aaKnown RBP11.38□□□□□ -0.59
PTPN7-204ENST00000462815 IFI44Q8TCB0 444 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 WBP1Q96G27 269 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 CCDC114Q96M63 670 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 LGMNQ99538 433 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 C1QTNF2Q9BXJ5 285 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 RAB6CQ9H0N0 254 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 NDFIP2Q9NV92 336 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 DNAJC28Q9NX36 388 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 GGT7Q9UJ14 662 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 CSNK1G3Q9Y6M4 447 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 COL12A1Q99715 3063 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 PIEZO2Q9H5I5 2752 aa11.38□□□□□ -0.59
PTPN7-204ENST00000462815 CXorf51AA0A1B0GTR3 108 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 EME2A4GXA9 379 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 ENDOD1O94919 500 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 PCDH8O95206 1070 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 PAK4O96013 591 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 ALPPL2P10696 532 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 OR1E1P30953 314 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 GKP32189 559 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 CCNHP51946 323 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 TMPRSS3P57727 454 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 HNRNPKP61978 463 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 RPS21P63220 83 aaKnown RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 PTK2Q05397 1052 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 DEUP1Q05D60 604 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 DRAP1Q14919 205 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 CARD16Q5EG05 197 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 MIIPQ5JXC2 388 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 ZCCHC8Q6NZY4 707 aaKnown RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 NLRP14Q86W24 1093 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 PARGQ86W56 976 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 LSMEM2Q8N112 164 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 PCDH20Q8N6Y1 951 aaKnown RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 ASB12Q8WXK4 309 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 NAF1Q96HR8 494 aaKnown RBP11.37□□□□□ -0.59
PTPN7-204ENST00000462815 PPP1R16AQ96I34 528 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 HAPLN3Q96S86 360 aa11.37□□□□□ -0.59
PTPN7-204ENST00000462815 DUSP23Q9BVJ7 150 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms