RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PPIDQ08752 370 aaKnown RBP15.63■□□□□ 0.09
LMNB1-203ENST00000460265 CNGA3Q16281 694 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 ZIC5Q96T25 663 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 C9IYK1 514 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 CDK4P11802 303 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PLK1P53350 603 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 OXCT1P55809 520 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 GJA9P57773 515 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 SLC18A2Q05940 514 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 ZBTB17Q13105 803 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PRKD1Q15139 912 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-203ENST00000460265 ANKRD20A4Q4UJ75 823 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 FAM117BQ6P1L5 589 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 RIPOR1Q6ZS17 1223 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 NANOGNBQ7Z5D8 188 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 IFNL1Q8IU54 200 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PPP1R10Q96QC0 940 aaKnown RBP15.63■□□□□ 0.09
LMNB1-203ENST00000460265 ANLNQ9NQW6 1124 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 GOLGA8CPA6NN73 597 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PRKCHP24723 683 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 NMBRP28336 390 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PEX6Q13608 980 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 ZNF460Q14592 562 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 KCTD21Q4G0X4 260 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 MORN1Q5T089 497 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 FAM171A1Q5VUB5 890 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 ZMIZ2Q8NF64 920 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PIWIL2Q8TC59 973 aaKnown RBP15.63■□□□□ 0.09
LMNB1-203ENST00000460265 SLC35B4Q969S0 331 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 RPRD1AQ96P16 312 aaPredicted RBP15.63■□□□□ 0.09
LMNB1-203ENST00000460265 BRD8Q9H0E9 1235 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 PRDM16Q9HAZ2 1276 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 TMLHEQ9NVH6 421 aa15.63■□□□□ 0.09
LMNB1-203ENST00000460265 AIM2O14862 343 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 DCXO43602 365 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 SERPINB5P36952 375 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CHRNA4P43681 627 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 PSMD7P51665 324 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CCR3P51677 355 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 SLC5A3P53794 718 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 SLC25A3Q00325 362 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CDH17Q12864 832 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 RGS9BPQ6ZS82 235 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 PTAR1Q7Z6K3 402 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CENPIQ92674 756 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-203ENST00000460265 SLX1AQ9BQ83 275 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 OXCT2Q9BYC2 517 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-203ENST00000460265 FETUBQ9UGM5 382 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 PIRTP0C851 137 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 NAGLUP54802 743 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 PRAMEP78395 509 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 GRAMD1BQ3KR37 738 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 FSTL4Q6MZW2 842 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 RAET1EQ8TD07 263 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 SLC26A7Q8TE54 656 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 TRIB2Q92519 343 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 FCRL3Q96P31 734 aaPredicted RBP15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CATSPERBQ9H7T0 1116 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 GIT1Q9Y2X7 761 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 FAM159BA6NKW6 160 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 C2P06681 752 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CRABP2P29373 138 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CRHR1P34998 444 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 HOXD12P35452 270 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 IRF9Q00978 393 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 PDK3Q15120 406 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 CTXN3Q4LDR2 81 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 NOMO2Q5JPE7 1267 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 KIAA1841Q6NSI8 718 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 LRRTM3Q86VH5 581 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 PPM1HQ9ULR3 514 aa15.62■□□□□ 0.09
LMNB1-203ENST00000460265 A0A1W2PQH9 124 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 NCAM2O15394 837 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 MTSS1O43312 755 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 AMHP03971 560 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 ALDOAP04075 364 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 VARSP26640 1264 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 GPR15P49685 360 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 SLC18A1P54219 525 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 LPCAT4Q643R3 524 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 KLHDC10Q6PID8 442 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 ZNF534Q76KX8 674 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 PPHLN1Q8NEY8 458 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 URGCPQ8TCY9 931 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 GIPC2Q8TF65 315 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 GRIP2Q9C0E4 1043 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 TRPV6Q9H1D0 765 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 SSU72Q9NP77 194 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 NUMBLQ9Y6R0 609 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 TMEM247A6NEH6 219 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 LSM1O15116 133 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 VCLP18206 1134 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 CCND3P30281 292 aaPredicted RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 RPL5P46777 297 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 TUSC3Q13454 348 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 CTC1Q2NKJ3 1217 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 ZNF470Q6ECI4 717 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 SPNS2Q8IVW8 549 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 DENND6AQ8IWF6 608 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 PIP4K2CQ8TBX8 421 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms