RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NEBLO76041 1014 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 PRKAR1AP10644 381 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 CYP3A7P24462 503 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 ANTXR2P58335 489 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 OSTNP61366 133 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 IKZF1Q13422 519 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 ATP1A1-AS1Q5TC04 95 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 MRM1Q6IN84 353 aaKnown RBP5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 NAPEPLDQ6IQ20 393 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 DSTYKQ6XUX3 929 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 TMTC3Q6ZXV5 915 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 USP30Q70CQ3 517 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 OTUD6AQ7L8S5 288 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 DSG4Q86SJ6 1040 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 CREG2Q8IUH2 290 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 CTCFLQ8NI51 663 aaPredicted RBP5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 SORCS1Q8WY21 1168 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 NDRG1Q92597 394 aaKnown RBP5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 PIWIL1Q96J94 861 aaKnown RBP5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 CCDC136Q96JN2 1154 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 SPRY4Q9C004 299 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 TTC12Q9H892 705 aaPredicted RBP5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 MCCC2Q9HCC0 563 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 EPB41L5Q9HCM4 733 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 ATP13A1Q9HD20 1204 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 RRN3Q9NYV6 651 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 RGL1Q9NZL6 768 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 WDR35Q9P2L0 1181 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 EMC9Q9Y3B6 208 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 LOXL2Q9Y4K0 774 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 PCDHGB6Q9Y5F9 930 aa5.5□□□□□ -1.53
SBDSP1-204ENST00000453858 VWFP04275 2813 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 A0A1W2PQM1 296 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 FAM47DPA6NHR8 397 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 LRRIQ4A6NIV6 560 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 SLITRK3O94933 977 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 ESR1P03372 595 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 JMJD7P0C870 316 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 ALPPL2P10696 532 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 COX6B1P14854 86 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 PROZP22891 400 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 UGT1A3P35503 534 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 MFAP3P55082 362 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 CDH8P55286 799 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 PPP2R5CQ13362 524 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 SPIDRQ14159 915 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 CRB2Q5IJ48 1285 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 JMJD6Q6NYC1 403 aaPredicted RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 ZCCHC8Q6NZY4 707 aaKnown RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 OR2T34Q8NGX1 318 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 LEO1Q8WVC0 666 aaPredicted RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 BRF1Q92994 677 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 SNRNP40Q96DI7 357 aaKnown RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 XPO6Q96QU8 1125 aaKnown RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 TTLL2Q9BWV7 592 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 POLR3FQ9H1D9 316 aaPredicted RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 CDT1Q9H211 546 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 NEUROG2Q9H2A3 272 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 NOL6Q9H6R4 1146 aaKnown RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 DCTPP1Q9H773 170 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 CHST11Q9NPF2 352 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 PRSS16Q9NQE7 514 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 ELOVL2Q9NXB9 296 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 CGGBP1Q9UFW8 167 aaPredicted RBP5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 CROTQ9UKG9 612 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 TCFL5Q9UL49 500 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 TNFSF13BQ9Y275 285 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 KCTD3Q9Y597 815 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 TAF6LQ9Y6J9 622 aa5.49□□□□□ -1.53
SBDSP1-204ENST00000453858 NEMP2A6NFY4 417 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 D6RAR5 112 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 NEDD8-MDP1E9PL57 170 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 PIRO00625 290 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 DKC1O60832 514 aaKnown RBP eCLIP5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 ZNF205O95201 554 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 LYPLA2O95372 231 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 CD8BP10966 210 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 ODC1P11926 461 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 VAV1P15498 845 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 RXRAP19793 462 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 CYP3A5P20815 502 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 FUT4P22083 530 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 HTR1EP28566 365 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 HOXC12P31275 282 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 GUCY2FP51841 1108 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 IST1P53990 364 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 EGR3Q06889 387 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 HS1BP3Q53T59 392 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 SLC45A4Q5BKX6 768 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 ZNF517Q6ZMY9 492 aaPredicted RBP5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 HTR3DQ70Z44 454 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 TRIM59Q8IWR1 403 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 AHI1Q8N157 1196 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 ACBD4Q8NC06 268 aa5.48□□□□□ -1.53
SBDSP1-204ENST00000453858 CHDHQ8NE62 594 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms