RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 KCNK3O14649 394 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 FLRT2O43155 660 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 PROS1P07225 676 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 OR1E1P30953 314 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 ADPRHP54922 357 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 ATP11AP98196 1134 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 MAMLD1Q13495 774 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 Q6ZVU0 165 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 ARCQ7LC44 396 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 PHLDB2Q86SQ0 1253 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 CHCHD4Q8N4Q1 142 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 SH2D3CQ8N5H7 860 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 EMC1Q8N766 993 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 RHBDD1Q8TEB9 315 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 CCDC114Q96M63 670 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 SLC6A18Q96N87 628 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 HAPLN3Q96S86 360 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 PCOLCE2Q9UKZ9 415 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 TPX2Q9ULW0 747 aaKnown RBP18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 NEUROG3Q9Y4Z2 214 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 PCDHGB2Q9Y5G2 931 aa18.41■□□□□ 0.54
SQSTM1-204ENST00000453046 MCF2LO15068 1137 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 ALOX15BO15296 676 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 SNAP91O60641 907 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 KRT37O76014 449 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 FTH1P19P0C7X4 201 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 SDC4P31431 198 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 DRD3P35462 400 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 CCT8P50990 548 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 CCR5P51681 352 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 CDO1Q16878 200 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 ARL13BQ3SXY8 428 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 POM121L1PQ3SYA9 428 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 TRNP1Q6NT89 227 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 SYT10Q6XYQ8 523 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 ZNF683Q8IZ20 524 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 LRRC57Q8N9N7 239 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 PIP4K2CQ8TBX8 421 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 UBE2Q2Q8WVN8 375 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 WDR24Q96S15 920 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 ORAI3Q9BRQ5 295 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 SELENOOQ9BVL4 669 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 VPS51Q9UID3 782 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 ANAPC7Q9UJX3 599 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 KLK13Q9UKR3 277 aa18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 APOBEC2Q9Y235 224 aaKnown RBP18.4■□□□□ 0.54
SQSTM1-204ENST00000453046 H0Y8X5 98 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 PLK4O00444 970 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 VILLO15195 856 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SLC7A4O43246 635 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 DFNA5O60443 496 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 CBFA2T3O75081 653 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 PALMO75781 387 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 MT-CO1P00395 513 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SRCP12931 536 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 CD38P28907 300 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 CTSKP43235 329 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 METAP1P53582 386 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SLC45A4Q5BKX6 768 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 PPP1R15BQ5SWA1 713 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SLFN11Q7Z7L1 901 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 KIF18AQ8NI77 898 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 RXFP2Q8WXD0 754 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SERAC1Q96JX3 654 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 PSMB7Q99436 277 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 CDC6Q99741 560 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 NAPGQ99747 312 aaPredicted RBP18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SPON2Q9BUD6 331 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 ZYG11BQ9C0D3 744 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 EBF2Q9HAK2 575 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 RRAGDQ9NQL2 400 aaPredicted RBP18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 DNAI1Q9UI46 699 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 SARDHQ9UL12 918 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 PPM1HQ9ULR3 514 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 HS3ST2Q9Y278 367 aa18.39■□□□□ 0.53
SQSTM1-204ENST00000453046 IGLV3-10A0A075B6K4 115 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 A0A0D9SEW6 157 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 CTAGE9A4FU28 777 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 SIGLEC16A6NMB1 481 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 CBX4O00257 560 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 BUB1BO60566 1050 aaPredicted RBP18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 CASQ1P31415 396 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 C15orf59Q2T9L4 293 aaPredicted RBP18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 KCNT1Q5JUK3 1230 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 DNTTIP2Q5QJE6 756 aaKnown RBP18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 LINGO4Q6UY18 593 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 DBX2Q6ZNG2 339 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 BNIPLQ7Z465 357 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 PRPF39Q86UA1 669 aaKnown RBP18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 PNPLA1Q8N8W4 532 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 DCAF4L2Q8NA75 395 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 FNIP1Q8TF40 1166 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 KDM4CQ9H3R0 1056 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 MSRB2Q9Y3D2 182 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 JRKLQ9Y4A0 524 aa18.38■□□□□ 0.53
SQSTM1-204ENST00000453046 FRYQ5TBA9 3013 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 ILVBLA1L0T0 632 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 K7ERQ8 282 aa18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 KPNA3O00505 521 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-204ENST00000453046 PLRG1O43660 514 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms