RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FRMD8Q9BZ67 464 aaPredicted RBP19.59■□□□□ 0.73
RPS28-202ENST00000449223 POLR1EQ9GZS1 481 aaKnown RBP19.59■□□□□ 0.73
RPS28-202ENST00000449223 TSPYL1Q9H0U9 437 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 DEC1Q9P2X7 70 aa19.59■□□□□ 0.73
RPS28-202ENST00000449223 DYNC1I1O14576 645 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 TMCC1O94876 653 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 TMEM63AO94886 807 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 CR2P20023 1033 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 CES1P23141 567 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 NSUN2Q08J23 767 aaKnown RBP eCLIP19.58■□□□□ 0.73
RPS28-202ENST00000449223 CYTH1Q15438 398 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 GEN1Q17RS7 908 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 PREPLQ4J6C6 727 aaPredicted RBP19.58■□□□□ 0.73
RPS28-202ENST00000449223 RALGPS1Q5JS13 557 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 FAM182AQ5T1J6 154 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 ANKRD22Q5VYY1 191 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 EMBQ6PCB8 327 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 ZCCHC9Q8N567 271 aaKnown RBP19.58■□□□□ 0.73
RPS28-202ENST00000449223 TSEN2Q8NCE0 465 aaKnown RBP19.58■□□□□ 0.73
RPS28-202ENST00000449223 ISG20Q96AZ6 181 aaKnown RBP19.58■□□□□ 0.73
RPS28-202ENST00000449223 FMO2Q99518 471 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 CINPQ9BW66 212 aaPredicted RBP19.58■□□□□ 0.73
RPS28-202ENST00000449223 NT5MQ9NPB1 228 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 VPS45Q9NRW7 570 aa19.58■□□□□ 0.73
RPS28-202ENST00000449223 AAR2Q9Y312 384 aaKnown RBP19.58■□□□□ 0.73
RPS28-202ENST00000449223 MUC22E2RYF6 1773 aaPredicted RBP19.58■□□□□ 0.72
RPS28-202ENST00000449223 MUSKO15146 869 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 TRIM24O15164 1050 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 NEBLO76041 1014 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 SUN1O94901 812 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 AP2A1O95782 977 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 MT-CO1P00395 513 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 ASLP04424 464 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 APRTP07741 180 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 ECT2LQ008S8 904 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 AAK1Q2M2I8 961 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 MAP9Q49MG5 647 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 MBLAC2Q68D91 279 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 GRAMD4Q6IC98 578 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 LINGO4Q6UY18 593 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 SLC44A3Q8N4M1 653 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 MAFAQ8NHW3 353 aaPredicted RBP19.57■□□□□ 0.72
RPS28-202ENST00000449223 ARRDC2Q8TBH0 407 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 ANKRD7Q92527 254 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 DNASE1L2Q92874 299 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 CEP44Q9C0F1 390 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 MTRF1LQ9UGC7 380 aaKnown RBP19.57■□□□□ 0.72
RPS28-202ENST00000449223 ACTL7AQ9Y615 435 aa19.57■□□□□ 0.72
RPS28-202ENST00000449223 TCRBV7S3A2A0A539 114 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 GOLGA6CA6NDK9 693 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 GOLGA6BA6NDN3 693 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 LOC730098B7Z3J9 87 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 PSMD3O43242 534 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 ERLIN1O75477 346 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 ANXA9O76027 345 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 GOLGA6DP0CG33 693 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 POLR2EP19388 210 aaKnown RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 PRPSAP1Q14558 356 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 FAXCQ5TGI0 409 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 LEKR1Q6ZMV7 388 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 PRPF39Q86UA1 669 aaKnown RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 SUGP1Q8IWZ8 645 aaKnown RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 SH2D3CQ8N5H7 860 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 TERB1Q8NA31 727 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 KDM1BQ8NB78 822 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 OXNAD1Q96HP4 312 aaPredicted RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 MLPHQ9BV36 600 aaPredicted RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 GOLGA6AQ9NYA3 693 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 LHX3Q9UBR4 397 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 LIMD1Q9UGP4 676 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 SLC25A13Q9UJS0 675 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 TIMM44O43615 452 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 PPFIA2O75334 1257 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 SRPRAP08240 638 aaKnown RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 MMP2P08253 660 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 SRCP12931 536 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 MAGEA3P43357 314 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 SLC6A11P48066 632 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 CSNK1DP48730 415 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 NUMBP49757 651 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 MPP3Q13368 585 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 PPP1R21Q6ZMI0 780 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 RELL1Q8IUW5 271 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 CSGALNACT1Q8TDX6 532 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 CAVIN3Q969G5 261 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 NUDCD1Q96RS6 583 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 LRRC40Q9H9A6 602 aa19.56■□□□□ 0.72
RPS28-202ENST00000449223 ARGLU1Q9NWB6 273 aaPredicted RBP19.56■□□□□ 0.72
RPS28-202ENST00000449223 E7EVH7 732 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 ATP9BO43861 1147 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 ZNF821O75541 412 aaPredicted RBP19.55■□□□□ 0.72
RPS28-202ENST00000449223 ATP5BP06576 529 aaKnown RBP19.55■□□□□ 0.72
RPS28-202ENST00000449223 DLDP09622 509 aaKnown RBP19.55■□□□□ 0.72
RPS28-202ENST00000449223 MLNP12872 115 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 CTSOP43234 321 aaPredicted RBP19.55■□□□□ 0.72
RPS28-202ENST00000449223 GEMP55040 296 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 NIPAL4Q0D2K0 466 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 MESP2Q0VG99 397 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 CEP128Q6ZU80 1094 aa19.55■□□□□ 0.72
RPS28-202ENST00000449223 ZNF534Q76KX8 674 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms