RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 HOXA7P31268 230 aaPredicted RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 GJC1P36383 396 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 EIF3BP55884 814 aaKnown RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 PSMC6P62333 389 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 TAP2Q03519 686 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 CBX2Q14781 532 aaPredicted RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 DNAL1Q4LDG9 190 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 PTRHD1Q6GMV3 140 aaKnown RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 ITPRIPL1Q6GPH6 555 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 SYCE2Q6PIF2 218 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 PDZD4Q76G19 769 aaPredicted RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 KCNK18Q7Z418 384 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 MARVELD2Q8N4S9 558 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 MCPH1Q8NEM0 835 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 OR52H1Q8NGJ2 320 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 U2AF1L4Q8WU68 220 aaKnown RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 CASKIN2Q8WXE0 1202 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 UFD1Q92890 307 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 CSPG4P5Q96PW8 444 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 BTBD9Q96Q07 612 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 HSD3B7Q9H2F3 369 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 RANBP3Q9H6Z4 567 aaPredicted RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 PNPLA8Q9NP80 782 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 TOPORSQ9NS56 1045 aaPredicted RBP8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 RIC8BQ9NVN3 520 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 SEPT3Q9UH03 358 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 VPS9D1Q9Y2B5 631 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 SNX24Q9Y343 169 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 ADGRB1O14514 1584 aa8.77□□□□□ -1.01
MCF2L2-203ENST00000447025 CLDN4O14493 209 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CCNB2O95067 398 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TNFAIP8O95379 198 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 GNAO1P09471 354 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 PRPS2P11908 318 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TCN1P20061 433 aaPredicted RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CMA1P23946 247 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 PTPN4P29074 926 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 MARCKSP29966 332 aaPredicted RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 NMT1P30419 496 aaKnown RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 SERPINB9P50453 376 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 RAB13P51153 203 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 MAPK12P53778 367 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CASP6P55212 293 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ITGADQ13349 1161 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ALG11Q2TAA5 492 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 FKBP9P1Q75LS8 142 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 PRSS42Q7Z5A4 293 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TAC4Q86UU9 113 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TDRPQ86YL5 185 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TRPV1Q8NER1 839 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 DTD1Q8TEA8 209 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 GATAD2BQ8WXI9 593 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ASB12Q8WXK4 309 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CELF1Q92879 486 aaKnown RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 FAM122AQ96E09 287 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 FOPNLQ96NB1 174 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 TGS1Q96RS0 853 aaKnown RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 NEU1Q99519 415 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 KIFC1Q9BW19 673 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 COG4Q9H9E3 785 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CAB39LQ9H9S4 337 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 VPS45Q9NRW7 570 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 VPS28Q9UK41 221 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 PCDHB5Q9Y5E4 795 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 A0A0G2JMP0 313 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 A0A0X1KG70 313 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 A8MXE2 369 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 DDX3XO00571 662 aaKnown RBP eCLIP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 GAS7O60861 476 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 PPM1BO75688 479 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 SLC22A3O75751 556 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CABYRO75952 493 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 APOL3O95236 402 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 RASAL1O95294 804 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 STSP08842 583 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 MAPK3P27361 379 aaPredicted RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 RPA1P27694 616 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 MMP13P45452 471 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 BMXP51813 675 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 DGKQP52824 942 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ADKP55263 362 aaKnown RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 CDH6P55285 790 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 GALEQ14376 348 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 SLC15A2Q16348 729 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ATP13A4Q4VNC1 1196 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 SLC25A24Q6NUK1 477 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 BLOC1S2Q6QNY1 142 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 LRRTM4Q86VH4 590 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 FAM217AQ8IXS0 508 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 MICALL2Q8IY33 904 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 UBL4BQ8N7F7 174 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 ACTRT1Q8TDG2 376 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 RFFLQ8WZ73 363 aa8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 MRPL48Q96GC5 212 aaKnown RBP8.76□□□□□ -1.01
MCF2L2-203ENST00000447025 SGCZQ96LD1 299 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms