RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ZNF567Q8N184 647 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 DHRSXQ8N5I4 330 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 ADCY4Q8NFM4 1077 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 TRMOQ9BU70 441 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 MRPS26Q9BYN8 205 aaKnown RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 BCO2Q9BYV7 579 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 COMMD8Q9NX08 183 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 AP4B1Q9Y6B7 739 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 METTL18O95568 372 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 MPSTP25325 297 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 POLD2P49005 469 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 SCNN1GP51170 649 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 CRYBB1P53674 252 aaPredicted RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 PKN3Q6P5Z2 889 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 LZICQ8WZA0 190 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 VPS33AQ96AX1 596 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 GLT1D1Q96MS3 346 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 UTP6Q9NYH9 597 aaKnown RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 FARP1Q9Y4F1 1045 aaPredicted RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 ADSLP30566 484 aaPredicted RBP16.83■□□□□ 0.29
TCOF1-206ENST00000445265 CA9Q16790 459 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 LPCAT4Q643R3 524 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 TTC30AQ86WT1 665 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 HORMAD1Q86X24 394 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 CENPLQ8N0S6 344 aaPredicted RBP16.83■□□□□ 0.29
TCOF1-206ENST00000445265 STAG3L4Q8TBR4 150 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 RHBDL2Q9NX52 303 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 TMEM216Q9P0N5 145 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 DNAJB4Q9UDY4 337 aa16.83■□□□□ 0.29
TCOF1-206ENST00000445265 SMIM35A0A1B0GVV1 85 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 CCDC154A6NI56 674 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 ITGALP20701 1170 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 PAX3P23760 479 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 RAD23AP54725 363 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 MAP3K10Q02779 954 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 GMLQ99445 158 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 RMND5AQ9H871 391 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 HMGXB4Q9UGU5 601 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 RPL9P32969 192 aaKnown RBP16.83■□□□□ 0.28
TCOF1-206ENST00000445265 NEK3P51956 506 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 ACTR3P61158 418 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
TCOF1-206ENST00000445265 BRMS1LQ5PSV4 323 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 TAS1R3Q7RTX0 852 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 FNDC5Q8NAU1 212 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 SEPHS2Q99611 448 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 GLOD4Q9HC38 313 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 CLIC5Q9NZA1 410 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 PAIP2BQ9ULR5 123 aaKnown RBP16.83■□□□□ 0.28
TCOF1-206ENST00000445265 ANKRD36CQ5JPF3 1778 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 PTPRJQ12913 1337 aa16.83■□□□□ 0.28
TCOF1-206ENST00000445265 SYNCRIPO60506 623 aaKnown RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 C22orf31O95567 290 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 YWHAQP27348 245 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CDCA2Q69YH5 1023 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 B3GNT9Q6UX72 402 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 P3H2Q8IVL5 708 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 TSPAN14Q8NG11 270 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 TWNKQ96RR1 684 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 GBA3Q9H227 469 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 ZBTB24O43167 697 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 AKR1A1P14550 325 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 L1CAMP32004 1257 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 SCNN1AP37088 669 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CDH18Q13634 790 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 DCLRE1AQ6PJP8 1040 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 LRRC8DQ7L1W4 858 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CDK5RAP1Q96SZ6 601 aaKnown RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 IGSF9Q9P2J2 1179 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 ZNF229Q9UJW7 825 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 LRP5O75197 1615 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 APOA1P02647 267 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 ATP6V1B2P21281 511 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CD86P42081 329 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 GTF2H3Q13889 308 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CLVS1Q8IUQ0 354 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 PTGR2Q8N8N7 351 aaPredicted RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 MYLPFQ96A32 169 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 PTCD3Q96EY7 689 aaKnown RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 SLC9A7Q96T83 725 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 KANSL3Q9P2N6 904 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 WASF2Q9Y6W5 498 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 EGFRP00533 1210 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 TTKP33981 857 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 GRIA3P42263 894 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 NRLP54845 237 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 NAA20P61599 178 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 PFKFB4Q16877 469 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 RNF220Q5VTB9 566 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 PYROXD2Q8N2H3 581 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 FOPNLQ96NB1 174 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 HNRNPABQ99729 332 aaKnown RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CHRAC1Q9NRG0 131 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 CATSPERZQ9NTU4 200 aa16.82■□□□□ 0.28
TCOF1-206ENST00000445265 FAM32AQ9Y421 112 aaKnown RBP16.82■□□□□ 0.28
TCOF1-206ENST00000445265 PRRG1O14668 218 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms