RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 YARSP54577 528 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 INHBCP55103 352 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 GSDMDP57764 484 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 NOP14P78316 857 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 TLE1Q04724 770 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 TARDBPQ13148 414 aaKnown RBP eCLIP5□□□□□ -1.61
PTPN4-206ENST00000441089 CAMK2GQ13555 558 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 PWP1Q13610 501 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 RAPGEF1Q13905 1077 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DRAP1Q14919 205 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 TMEM201Q5SNT2 666 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 TRIM68Q6AZZ1 485 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ZNF280DQ6N043 979 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 CD300LGQ6UXG3 332 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 RAD9BQ6WBX8 426 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 GAREM2Q75VX8 874 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 IRF2BP2Q7Z5L9 587 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 USP37Q86T82 979 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 CDH24Q86UP0 819 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ITIH5Q86UX2 942 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 NT5DC4Q86YG4 428 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 CNGA4Q8IV77 575 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 CMTM8Q8IZV2 173 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 LSMEM2Q8N112 164 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 C17orf53Q8N3J3 647 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 CCDC33Q8N5R6 958 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DEFB119Q8N690 84 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 FRMD1Q8N878 549 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 OR8K1Q8NGG5 319 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DNAJB8Q8NHS0 232 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 KCNE4Q8WWG9 221 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 GATAD2BQ8WXI9 593 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ATP2A3Q93084 1043 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 PSMG2Q969U7 264 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ZNF419Q96HQ0 510 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 ANKRD36BP1Q96IX9 119 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 Q96M66 194 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ZNF578Q96N58 590 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 NT5C1BQ96P26 610 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 PANX2Q96RD6 677 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DPH2Q9BQC3 489 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 RSRP1Q9BUV0 290 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 STK33Q9BYT3 514 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DPH1Q9BZG8 443 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 EDEM3Q9BZQ6 932 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 SDCBP2Q9H190 292 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 SMYD3Q9H7B4 428 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ECT2Q9H8V3 914 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 UBE2TQ9NPD8 197 aaPredicted RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 STARD5Q9NSY2 213 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DPP3Q9NY33 737 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 AIPL1Q9NZN9 384 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ARHGAP20Q9P2F6 1191 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 APEX2Q9UBZ4 518 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 FTSJ1Q9UET6 329 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 WDR3Q9UNX4 943 aaKnown RBP eCLIP5□□□□□ -1.61
PTPN4-206ENST00000441089 DERAQ9Y315 318 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 LUC7L2Q9Y383 392 aaKnown RBP5□□□□□ -1.61
PTPN4-206ENST00000441089 YIPF1Q9Y548 306 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 NME7Q9Y5B8 376 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 DOCK9Q9BZ29 2069 aa5□□□□□ -1.61
PTPN4-206ENST00000441089 ANAPC1Q9H1A4 1944 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 LRRK1Q38SD2 2015 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 A0A0U1RQJ8 604 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 TCRBV21S2A2A0A5A6 115 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 FAM221AA4D161 298 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 K7ENP7 123 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 K7EQS6 105 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 PIRO00625 290 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 KLK10O43240 276 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 NDUFS2O75306 463 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 RFPL3O75679 317 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 GFPT2O94808 682 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 KRT19P08727 400 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 ZGLP1P0C6A0 271 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 ARSAP15289 507 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 CYP3A5P20815 502 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 SOX5P35711 763 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 RBP5P82980 135 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 GCNT1Q02742 428 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 CETN1Q12798 172 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 MYO1EQ12965 1108 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 TRPC3Q13507 836 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 CUL2Q13617 745 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 MRPL58Q14197 206 aaKnown RBP4.99□□□□□ -1.61
PTPN4-206ENST00000441089 ARHGAP44Q17R89 818 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 ASTE1Q2TB18 679 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-206ENST00000441089 GAB4Q2WGN9 574 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 HLA-BQ31612 363 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 ZNF699Q32M78 642 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 CTXN3Q4LDR2 81 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 HS1BP3Q53T59 392 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 SFMBT2Q5VUG0 894 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 C9orf57Q5W0N0 161 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 INO80CQ6PI98 192 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-206ENST00000441089 SCARA5Q6ZMJ2 495 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 ZNF571Q7Z3V5 609 aaPredicted RBP4.99□□□□□ -1.61
PTPN4-206ENST00000441089 LIMS2Q7Z4I7 341 aa4.99□□□□□ -1.61
PTPN4-206ENST00000441089 DNAJB7Q7Z6W7 309 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms