RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GCATO75600 419 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 MAP4P27816 1152 aaKnown RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 ARL2P36404 184 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 CTBP1Q13363 440 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 PDK2Q15119 407 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 CLEC6AQ6EIG7 209 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 FSTL5Q8N475 847 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 ACMSDQ8TDX5 336 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 VPS39Q96JC1 886 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 NPLQ9BXD5 320 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 POLE4Q9NR33 117 aa13.57□□□□□ -0.24
ACTN1-204ENST00000438964 EVLQ9UI08 416 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-204ENST00000438964 RGPD3A6NKT7 1758 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 RGPD4Q7Z3J3 1758 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 GABBR2O75899 941 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 OXSR1O95747 527 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MTHFD1P11586 935 aaKnown RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MATN1P21941 496 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 OXTRP30559 389 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 SEMA5AQ13591 1074 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 PHF21BQ96EK2 531 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MAF1Q9H063 256 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 OAZ3Q9UMX2 235 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 RAP2CQ9Y3L5 183 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MTF2Q9Y483 593 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ALDH1A2O94788 518 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 PFKMP08237 780 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 NPR1P16066 1061 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 NCK1P16333 377 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 TPSB2P20231 275 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CNTFP26441 200 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ELK4P28324 431 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ADORA2BP29275 332 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 BFSP2Q13515 415 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 TPSAB1Q15661 275 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CCDC153Q494R4 210 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 TBCELQ5QJ74 424 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 REP15Q6BDI9 236 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CNSTQ6PJW8 725 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CROCCP3Q8IVE0 287 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 DENND6AQ8IWF6 608 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ZNF567Q8N184 647 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 Q8N9G6 341 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 NXNL1Q96CM4 212 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ASB9Q96DX5 294 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 BIRC8Q96P09 236 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 FTHL17Q9BXU8 183 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MRPL4Q9BYD3 311 aaKnown RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ZFYVE28Q9HCC9 887 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 KLHL8Q9P2G9 620 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 HESX1Q9UBX0 185 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 A0A0A0MRY4 1105 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 HEATR9A2RTY3 570 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 DLX3O60479 287 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 CILPO75339 1184 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MMP10P09238 476 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 SPRP35270 261 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 C1QTNF8P60827 252 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 RHDQ02161 417 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 DNASE1L3Q13609 305 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 MAPK11Q15759 364 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ZBED5Q49AG3 693 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 BOLA3Q53S33 107 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-204ENST00000438964 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 TTC16Q8NEE8 873 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 USP33Q8TEY7 942 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 EXT2Q93063 718 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 FAM149B1Q96BN6 582 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 SPATA13Q96N96 652 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 ADI1Q9BV57 179 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 PRDM12Q9H4Q4 367 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 FAM96AQ9H5X1 160 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 PRDM16Q9HAZ2 1276 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 TLK1Q9UKI8 766 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 WDR37Q9Y2I8 494 aa13.56□□□□□ -0.24
ACTN1-204ENST00000438964 BRCA2P51587 3418 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 H0YCG3 227 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 DLGAP1O14490 977 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 EI24O14681 340 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 NMBRP28336 390 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 NKX2-5P52952 324 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-204ENST00000438964 MPP1Q00013 466 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 FASTKQ14296 549 aaKnown RBP13.55□□□□□ -0.24
ACTN1-204ENST00000438964 VPS72Q15906 364 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 SOWAHAQ2M3V2 549 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 PGS1Q32NB8 556 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 C6orf10Q5SRN2 563 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 ANKRD26P1Q6NSI1 321 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms