RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 DNAJC12Q9UKB3 198 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 GTF3C3Q9Y5Q9 886 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 HS3ST4Q9Y661 456 aa7.95□□□□□ -1.14
VPS50-204ENST00000438395 ASXL3Q9C0F0 2248 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 A0A1W2PQU0 124 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 BECN2A8MW95 431 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 GOLGA8SH3BPF8 625 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 CBX4O00257 560 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 NEMP1O14524 444 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 SLC31A1O15431 190 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 FFAR2O15552 330 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 RNGTTO60942 597 aaKnown RBP7.94□□□□□ -1.14
VPS50-204ENST00000438395 GADD45BO75293 160 aaPredicted RBP7.94□□□□□ -1.14
VPS50-204ENST00000438395 LSM8O95777 96 aaKnown RBP7.94□□□□□ -1.14
VPS50-204ENST00000438395 TPM2P07951 284 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 THEGLP0DJG4 465 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 CKMT2P17540 419 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 PON1P27169 355 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 OR1E1P30953 314 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 CHRNA3P32297 505 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 ETFBP38117 255 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 RXRGP48443 463 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 METAP1P53582 386 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 UBE2HP62256 183 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 APBA1Q02410 837 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 VAC14Q08AM6 782 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 PTPN20Q4JDL3 420 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 NEK5Q6P3R8 708 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 C22orf39Q6P5X5 142 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 PTAR1Q7Z6K3 402 aaPredicted RBP7.94□□□□□ -1.14
VPS50-204ENST00000438395 SETD3Q86TU7 594 aaPredicted RBP7.94□□□□□ -1.14
VPS50-204ENST00000438395 SLC47A2Q86VL8 602 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 HORMAD1Q86X24 394 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 SH2D3CQ8N5H7 860 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 C18orf8Q96DM3 657 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 SPON2Q9BUD6 331 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 EBF2Q9HAK2 575 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 PIGVQ9NUD9 493 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 VPS51Q9UID3 782 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 SARDHQ9UL12 918 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 PPM1HQ9ULR3 514 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 HS3ST2Q9Y278 367 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 TBC1D30Q9Y2I9 924 aa7.94□□□□□ -1.14
VPS50-204ENST00000438395 FLNBO75369 2602 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 A0A087WV48 116 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 NEMP2A6NFY4 417 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 A6NNZ2 444 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 FOXN3O00409 490 aaPredicted RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 WNT9AO14904 365 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SNAP91O60641 907 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SRGAP2O75044 1071 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 CAPNS1P04632 268 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SRCP12931 536 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 HNRNPA2B1P22626 353 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 GLDCP23378 1020 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 RRM1P23921 792 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SCNN1AP37088 669 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 ABL2P42684 1182 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 CXCR3P49682 368 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 IRAK1P51617 712 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 NEK3P51956 506 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 GEMIN4P57678 1058 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 E2F1Q01094 437 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 POU4F2Q12837 409 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 TARDBPQ13148 414 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS50-204ENST00000438395 ZNF211Q13398 564 aaPredicted RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 SHBQ15464 509 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 ARL13BQ3SXY8 428 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SLC25A52Q3SY17 297 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SFMBT2Q5VUG0 894 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 TAF3Q5VWG9 929 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 FBXL19Q6PCT2 694 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 LINGO4Q6UY18 593 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 ERN2Q76MJ5 926 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 ERICH1Q86X53 443 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 SPATS2Q86XZ4 545 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 DRC7Q8IY82 874 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 FAM71AQ8IYT1 594 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 RYBPQ8N488 228 aaPredicted RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 WDTC1Q8N5D0 677 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 TMIEQ8NEW7 156 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 ZNF397Q8NF99 534 aaPredicted RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 KLK6Q92876 244 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 ABCG4Q9H172 646 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 TNKS2Q9H2K2 1166 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 NDST4Q9H3R1 872 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 ATP13A1Q9HD20 1204 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 PLCB1Q9NQ66 1216 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 KLHL11Q9NVR0 708 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 DNAJC28Q9NX36 388 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 IL36AQ9UHA7 158 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 IPO11Q9UI26 975 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 CLCA2Q9UQC9 943 aa7.93□□□□□ -1.14
VPS50-204ENST00000438395 GCN1Q92616 2671 aaKnown RBP7.93□□□□□ -1.14
VPS50-204ENST00000438395 HELZ2Q9BYK8 2649 aaKnown RBP7.92□□□□□ -1.14
VPS50-204ENST00000438395 ILVBLA1L0T0 632 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 K7ERQ8 282 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 SIGLEC6O43699 453 aa7.92□□□□□ -1.14
VPS50-204ENST00000438395 CNTN5O94779 1100 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms