RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CCKBRP32239 447 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 GGCXP38435 758 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 GPD2P43304 727 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 RABIFP47224 123 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 ARSDP51689 593 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 INHBCP55103 352 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 ADKP55263 362 aaKnown RBP8.22□□□□□ -1.09
CSTF1-203ENST00000428552 LRMPQ12912 555 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 SERINC3Q13530 473 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 MORC3Q14149 939 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 SPIDRQ14159 915 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 TAF5Q15542 800 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 C5orf22Q49AR2 442 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 ARSIQ5FYB1 569 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 TMEM270Q6UE05 265 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 NYAP1Q6ZVC0 841 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 TMPRSS9Q7Z410 1059 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 ZFAND4Q86XD8 727 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
CSTF1-203ENST00000428552 GUF1Q8N442 669 aaKnown RBP8.22□□□□□ -1.09
CSTF1-203ENST00000428552 KYQ8NBH2 561 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 WDR48Q8TAF3 677 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 ZNF564Q8TBZ8 553 aaPredicted RBP8.22□□□□□ -1.09
CSTF1-203ENST00000428552 GRIN3AQ8TCU5 1115 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 UBXN4Q92575 508 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 NAT6Q93015 286 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 LENG8Q96PV6 779 aaPredicted RBP8.22□□□□□ -1.09
CSTF1-203ENST00000428552 IL12RB2Q99665 862 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 EPB41L5Q9HCM4 733 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 VPS51Q9UID3 782 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 GGT7Q9UJ14 662 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 PADI4Q9UM07 663 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 ZFC3H1O60293 1989 aaKnown RBP8.22□□□□□ -1.09
CSTF1-203ENST00000428552 TRPM6Q9BX84 2022 aa8.22□□□□□ -1.09
CSTF1-203ENST00000428552 NOTCH2Q04721 2471 aa8.21□□□□□ -1.09
CSTF1-203ENST00000428552 IGLON5A6NGN9 336 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 AP1G1O43747 822 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 LEFTY1O75610 366 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 CNTN5O94779 1100 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ADRB3P13945 408 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 TSHRP16473 764 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ABL2P42684 1182 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 RPS21P63220 83 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 CCL7P80098 99 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ZFP36L1Q07352 338 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 DPYDQ12882 1025 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 EIF3IQ13347 325 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 AUHQ13825 339 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 EDRF1Q3B7T1 1238 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 C4orf17Q53FE4 359 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ALFQ53S48 1182 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 PRRT3Q5FWE3 981 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 TTC39BQ5VTQ0 682 aaPredicted RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 OTUD1Q5VV17 481 aaPredicted RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 KIAA1161Q6NSJ0 714 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 DENND1BQ6P3S1 775 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 LINGO4Q6UY18 593 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 DPY19L3Q6ZPD9 716 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 PARS2Q7L3T8 475 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 JAMLQ86YT9 394 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 CEP57L1Q8IYX8 460 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ZNF683Q8IZ20 524 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 PHACTR4Q8IZ21 702 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 LMO3Q8TAP4 145 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 SLC35C1Q96A29 364 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 CCDC74AQ96AQ1 378 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 FAM149B1Q96BN6 582 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 CENPTQ96BT3 561 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 INTS4Q96HW7 963 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 TBATAQ96M53 351 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ZNF396Q96N95 335 aaPredicted RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 RPRD1AQ96P16 312 aaPredicted RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 SLC4A5Q9BY07 1137 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 TNKS2Q9H2K2 1166 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 ANLNQ9NQW6 1124 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 FAM13BQ9NYF5 915 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 SPASTQ9UBP0 616 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 PISDQ9UG56 409 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 APOBEC3BQ9UH17 382 aaKnown RBP8.21□□□□□ -1.1
CSTF1-203ENST00000428552 VPS28Q9UK41 221 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 VANGL2Q9ULK5 521 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 HPSEQ9Y251 543 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 LOXL2Q9Y4K0 774 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 HS3ST4Q9Y661 456 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 LRP4O75096 1905 aa8.21□□□□□ -1.1
CSTF1-203ENST00000428552 SPTAN1Q13813 2472 aaKnown RBP8.2□□□□□ -1.1
CSTF1-203ENST00000428552 A0A0D9SEW6 157 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 BLACEA4D250 179 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 ANKRD62A6NC57 917 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.2□□□□□ -1.1
CSTF1-203ENST00000428552 E5RJQ4 531 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 ZMPSTE24O75844 475 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 PRNPP04156 253 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 RPLP0P05388 317 aaKnown RBP8.2□□□□□ -1.1
CSTF1-203ENST00000428552 PFKFB1P16118 471 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 ITGB7P26010 798 aa8.2□□□□□ -1.1
CSTF1-203ENST00000428552 RPL13P26373 211 aaKnown RBP8.2□□□□□ -1.1
CSTF1-203ENST00000428552 IGFALSP35858 605 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms