RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 DDX3XO00571 662 aaKnown RBP eCLIP18.77■□□□□ 0.65e-8■■■□□ 17.3
GPC1-205ENST00000427506 BUB1O43683 1085 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 KDELR3O43731 214 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 CBFA2T3O75081 653 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 RNF8O76064 485 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 PCDH8O95206 1070 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 NEK5Q6P3R8 708 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 DBX2Q6ZNG2 339 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 KLK6Q92876 244 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 ISG20Q96AZ6 181 aaKnown RBP18.77■□□□□ 0.6
GPC1-205ENST00000427506 ZNF653Q96CK0 615 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 ELF4Q99607 663 aaPredicted RBP18.77■□□□□ 0.6
GPC1-205ENST00000427506 CDC6Q99741 560 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.77■□□□□ 0.6
GPC1-205ENST00000427506 HDAC8Q9BY41 377 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 MYO1AQ9UBC5 1043 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 WASF3Q9UPY6 502 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 APOBEC2Q9Y235 224 aaKnown RBP18.77■□□□□ 0.6
GPC1-205ENST00000427506 WASF2Q9Y6W5 498 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 A0A1B0GTQ1 180 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 A0A1W2PQU0 124 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
GPC1-205ENST00000427506 PRAMEF26H0Y7S4 382 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 RNF103O00237 685 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 SLC31A1O15431 190 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 MAGEC1O60732 1142 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 CD160O95971 181 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 FTH1P19P0C7X4 201 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 GRK6P43250 576 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 NEK3P51956 506 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 TPI1P60174 286 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 SNRPD1P62314 119 aaKnown RBP18.76■□□□□ 0.59
GPC1-205ENST00000427506 INAVAQ3KP66 663 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 FBXL19Q6PCT2 694 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 CHCHD4Q8N4Q1 142 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 MFSD2AQ8NA29 543 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 OR6K2Q8NGY2 324 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 CPLX3Q8WVH0 158 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 TRIM11Q96F44 468 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 DHX35Q9H5Z1 703 aaKnown RBP18.76■□□□□ 0.59
GPC1-205ENST00000427506 GPATCH2LQ9NWQ4 482 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 PCSK1NQ9UHG2 260 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 AP4E1Q9UPM8 1137 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 BTBD3Q9Y2F9 522 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 SCINQ9Y6U3 715 aa18.76■□□□□ 0.59
GPC1-205ENST00000427506 A0A1W2PQJ5 194 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 TMEM191CA6NGB0 347 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 KRIT1O00522 736 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 FGF10O15520 208 aaPredicted RBP18.75■□□□□ 0.59
GPC1-205ENST00000427506 PCDHGA12O60330 932 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 ITGB7P26010 798 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 NXPH1P58417 271 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 YBEYP58557 167 aaPredicted RBP18.75■□□□□ 0.59
GPC1-205ENST00000427506 ST3GAL2Q16842 350 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 ZSCAN23Q3MJ62 389 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 VPS36Q86VN1 386 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 HORMAD1Q86X24 394 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 PLPP6Q8IY26 295 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 PNPLA1Q8N8W4 532 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 OR2AP1Q8NGE2 309 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 MYOCQ99972 504 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 MRPL47Q9HD33 250 aaKnown RBP18.75■□□□□ 0.59
GPC1-205ENST00000427506 DONSONQ9NYP3 566 aa18.75■□□□□ 0.59
GPC1-205ENST00000427506 BZW2Q9Y6E2 419 aaKnown RBP18.75■□□□□ 0.59
GPC1-205ENST00000427506 GOLGA8CPA6NN73 597 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 WASH4PA8MWX3 477 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 RASA4BC9J798 803 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 DAPK3O43293 454 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 RASA4O43374 803 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 PRPSAP2O60256 369 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 GSRP00390 522 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 ITGAVP06756 1048 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 MYBL1P10243 752 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 ADRB3P13945 408 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 PRLRP16471 622 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 GKP32189 559 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 HTR7P34969 479 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 ARRB1P49407 418 aaPredicted RBP18.74■□□□□ 0.59
GPC1-205ENST00000427506 SKOR2Q2VWA4 1001 aaPredicted RBP18.74■□□□□ 0.59
GPC1-205ENST00000427506 PARP15Q460N3 678 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 ERMARDQ5T6L9 678 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 GLRX5Q86SX6 157 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 IQCHQ86VS3 1027 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 GATAD2AQ86YP4 633 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 HMCESQ96FZ2 354 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 LRIG1Q96JA1 1093 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 TRIM7Q9C029 511 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
GPC1-205ENST00000427506 IFNKQ9P0W0 207 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 KLK13Q9UKR3 277 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 CA5BQ9Y2D0 317 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 NEUROG3Q9Y4Z2 214 aa18.74■□□□□ 0.59
GPC1-205ENST00000427506 EEF2KO00418 725 aaKnown RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 YKT6O15498 198 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 TMCC1O94876 653 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 POP4O95707 220 aaKnown RBP18.73■□□□□ 0.59
GPC1-205ENST00000427506 AKT2P31751 481 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 PBX1P40424 430 aa18.73■□□□□ 0.59
GPC1-205ENST00000427506 RAD51Q06609 339 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms