RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 CDK7P50613 346 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 NAPAP54920 295 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 CTDSPL2Q05D32 466 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 TPTE2Q6XPS3 522 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 RFX6Q8HWS3 928 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 ERVK-19Q9WJR5 959 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 CDK13Q14004 1512 aaKnown RBP7.87□□□□□ -1.15
LINC00649-203ENST00000427447 FAM220BPB1ANY3 271 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 LAD1O00515 517 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 RBP3P10745 1247 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 PHKG2P15735 406 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 CCNOP22674 350 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 KLF10Q13118 480 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 GALEQ14376 348 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 SWSAP1Q6NVH7 229 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 ZNF517Q6ZMY9 492 aaPredicted RBP7.87□□□□□ -1.15
LINC00649-203ENST00000427447 KCTD1Q719H9 257 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 CCDC116Q8IYX3 515 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 FUNDC2Q9BWH2 189 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 GDAP2Q9NXN4 497 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 PRG4Q92954 1404 aaPredicted RBP7.87□□□□□ -1.15
LINC00649-203ENST00000427447 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 ANKRD26Q9UPS8 1709 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 ACOD1A6NK06 481 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 GATCO43716 136 aaKnown RBP7.87□□□□□ -1.15
LINC00649-203ENST00000427447 CHRNGP07510 517 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 SRCP12931 536 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 NUDT2P50583 147 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 RAB8AP61006 207 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 NAE1Q13564 534 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 GPR176Q14439 515 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 SEC23BQ15437 767 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 FUT11Q495W5 492 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 SPDYE2Q495Y8 402 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 VSTM4Q8IW00 320 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 ADHFE1Q8IWW8 467 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 TMEM35BQ8NCS4 154 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 DNAJA4Q8WW22 397 aaPredicted RBP7.87□□□□□ -1.15
LINC00649-203ENST00000427447 HSPA12BQ96MM6 686 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 SPATA16Q9BXB7 569 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 FRMD8Q9BZ67 464 aaPredicted RBP7.87□□□□□ -1.15
LINC00649-203ENST00000427447 KCNH7Q9NS40 1196 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 KLHL28Q9NXS3 571 aa7.87□□□□□ -1.15
LINC00649-203ENST00000427447 C12orf71A8MTZ7 269 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CES2O00748 559 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 G0S2P27469 103 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 LUMP51884 338 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 ELF3P78545 371 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 ZNF200P98182 395 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 GK3PQ14409 553 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 KCNA10Q16322 511 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 EXT2Q93063 718 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 PPP1R2P1Q96PQ5 205 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 WDR24Q96S15 920 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 ACBD6Q9BR61 282 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 ADAM28Q9UKQ2 775 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CPED1A4D0V7 1026 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 FADS2O95864 444 aaKnown RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 SLC16A8O95907 504 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 MYBP10242 640 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 PPP3CBP16298 524 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 RPA1P27694 616 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 GNRHRP30968 328 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 AP3B2Q13367 1082 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 PTGES3Q15185 160 aaKnown RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 EAPPQ56P03 285 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CRTC3Q6UUV7 619 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 MALSU1Q96EH3 234 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 NGLY1Q96IV0 654 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 BTBD9Q96Q07 612 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 NCOA5Q9HCD5 579 aaKnown RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 SLC24A2Q9UI40 661 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 ARHGEF35A5YM69 484 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 TMEM11P17152 192 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 MPIP34949 423 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 NR6A1Q15406 480 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 LPCAT4Q643R3 524 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CASP12Q6UXS9 341 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 MOCOSQ96EN8 888 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 ZNF408Q9H9D4 720 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 PAK6Q9NQU5 681 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-203ENST00000427447 PLK2Q9NYY3 685 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CCDC167Q9P0B6 97 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 IKZF3Q9UKT9 509 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 A8MVJ9 347 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 TGOLN2O43493 480 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 FKTNO75072 461 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CD9P21926 228 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 NT5C2P49902 561 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 CYP24A1Q07973 514 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 DPYSQ14117 519 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 AMIGO1Q86WK6 493 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 TCTE3Q8IZS6 198 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 SUPT20HQ8NEM7 779 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 SLC7A3Q8WY07 619 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 C16orf58Q96GQ5 468 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 MANSC1Q9H8J5 431 aa7.86□□□□□ -1.15
LINC00649-203ENST00000427447 SCPEP1Q9HB40 452 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms