RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 DMXL2Q8TDJ6 3036 aa12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GOLGA4Q13439 2230 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CXorf51AA0A1B0GTR3 108 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 EME2A4GXA9 379 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DRGXA6NNA5 263 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ENDOD1O94919 500 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GJB6O95452 261 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SFTPCP11686 197 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ADRB3P13945 408 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CTSEP14091 401 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 NME1P15531 152 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 XPAP23025 273 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 RRM1P23921 792 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ITGB7P26010 798 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CXCR3P49682 368 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 STX17P56962 302 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SPIDRQ14159 915 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CDKN3Q16667 212 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZNF542PQ5EBM4 170 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FAXCQ5TGI0 409 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C22orf39Q6P5X5 142 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ARRDC3Q96B67 414 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C18orf8Q96DM3 657 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC46A1Q96NT5 459 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 HAPLN3Q96S86 360 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CPXM1Q96SM3 734 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZYG11BQ9C0D3 744 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 STRADBQ9C0K7 418 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TNKS2Q9H2K2 1166 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CPNE5Q9HCH3 593 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SEPT10Q9P0V9 454 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MAN1B1Q9UKM7 699 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SATB2Q9UPW6 733 aa12.51□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CABIN1Q9Y6J0 2220 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DSPP15924 2871 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SPEGQ15772 3267 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TMEM110-MUSTN1A8MSY1 372 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SNAP91O60641 907 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C1QL1O75973 258 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 POP4O95707 220 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MT-CO1P00395 513 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CTSLP07711 333 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 YPEL5P62699 121 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PITX1P78337 314 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 EIF3IQ13347 325 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ELOCQ15369 112 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC25A52Q3SY17 297 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TRIM65Q6PJ69 517 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GCNT7Q6ZNI0 430 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DPY19L3Q6ZPD9 716 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FAM183BPQ6ZVS7 135 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SDR16C5Q8N3Y7 309 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZSCAN1Q8NBB4 408 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DENND6BQ8NEG7 585 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 OR6C4Q8NGE1 309 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ISG20Q96AZ6 181 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MED8Q96G25 268 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 BMFQ96LC9 184 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 OSBPL1AQ9BXW6 950 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CLMPQ9H6B4 373 aa12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZFR2Q9UPR6 939 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB3-203ENST00000425319 NUMA1Q14980 2115 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CCDC187A0A096LP49 1063 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GTPBP10A4D1E9 387 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PPP1R3GB7ZBB8 358 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 K7ERQ8 282 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZW10O43264 779 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 NEBLO76041 1014 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CNTN5O94779 1100 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TNFSF15O95150 251 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ALPIP09923 528 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 HTR1BP28222 390 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SCNN1AP37088 669 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MTIF2P46199 727 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SERPINH1P50454 418 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PPARDQ03181 441 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FZD2Q14332 565 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DEFB133Q30KQ1 61 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZSCAN23Q3MJ62 389 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TMEM259Q4ZIN3 620 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SEL1L3Q68CR1 1132 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LINGO4Q6UY18 593 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TFAP2DQ7Z6R9 452 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C14orf80Q86SX3 495 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TTC7BQ86TV6 843 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZNF354CQ86Y25 554 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CHST14Q8NCH0 376 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms