RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TRIM68Q6AZZ1 485 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 GRAMD4Q6IC98 578 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 CENPUQ71F23 418 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 PRUNE1Q86TP1 453 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 SUGP1Q8IWZ8 645 aaKnown RBP10.5□□□□□ -0.73
MDC1-205ENST00000425072 APCDD1Q8J025 514 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 CNTD1Q8N815 330 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 NAT8LQ8N9F0 302 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 OR52K2Q8NGK3 314 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 FBXO25Q8TCJ0 367 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 USP33Q8TEY7 942 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 CPT1BQ92523 772 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 ISG20Q96AZ6 181 aaKnown RBP10.5□□□□□ -0.73
MDC1-205ENST00000425072 ZFYVE19Q96K21 471 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 LMLNQ96KR4 655 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 FMO2Q99518 471 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 KXD1Q9BQD3 176 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 GBA3Q9H227 469 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 PDFQ9HBH1 243 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 XAB2Q9HCS7 855 aaKnown RBP10.5□□□□□ -0.73
MDC1-205ENST00000425072 EIF2B3Q9NR50 452 aaKnown RBP10.5□□□□□ -0.73
MDC1-205ENST00000425072 ZDHHC18Q9NUE0 388 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
MDC1-205ENST00000425072 LIMD1Q9UGP4 676 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 FAM153AQ9UHL3 310 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 VPS51Q9UID3 782 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 CLEC4EQ9ULY5 219 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
MDC1-205ENST00000425072 BRWD1Q9NSI6 2320 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 MAGEB16A2A368 324 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 TULP3O75386 442 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 EPOP01588 193 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 SRPRAP08240 638 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 SERPINF2P08697 491 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 GLULP15104 373 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 NFKB1P19838 968 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 PSMB4P28070 264 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 CD68P34810 354 aaPredicted RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 GJA4P35212 333 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 MAPK8P45983 427 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 CSNK1DP48730 415 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 NPY2RP49146 381 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 ST8SIA6P61647 398 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 SNRPD1P62314 119 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 PFKPQ01813 784 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 RAD51Q06609 339 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 ZBTB17Q13105 803 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 GRM2Q14416 872 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 KCNJ11Q14654 390 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 EIF4HQ15056 248 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 SLC14A2Q15849 920 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 AAK1Q2M2I8 961 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 MBLAC2Q68D91 279 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 NAPEPLDQ6IQ20 393 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 LRRC8BQ6P9F7 803 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 ZDHHC24Q6UX98 284 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 PLPP6Q8IY26 295 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 ZCCHC9Q8N567 271 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 ATP11CQ8NB49 1132 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 KDM1BQ8NB78 822 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 CAVIN3Q969G5 261 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 IMP4Q96G21 291 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 RPP25Q9BUL9 199 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 CEP41Q9BYV8 373 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 CEP44Q9C0F1 390 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 C8orf33Q9H7E9 229 aaPredicted RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 LRRC40Q9H9A6 602 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 KCNK12Q9HB15 430 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 HPS4Q9NQG7 708 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 TTLL3Q9Y4R7 772 aa10.49□□□□□ -0.73
MDC1-205ENST00000425072 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 NYNRINQ9P2P1 1898 aaKnown RBP10.49□□□□□ -0.73
MDC1-205ENST00000425072 MUC6Q6W4X9 2439 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.48□□□□□ -0.73
MDC1-205ENST00000425072 TBC1D3BA6NDS4 549 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 SDR42E2A6NKP2 422 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 SNAP91O60641 907 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 SUN1O94901 812 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 AP2A1O95782 977 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 APODP05090 189 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 DLDP09622 509 aaKnown RBP10.48□□□□□ -0.73
MDC1-205ENST00000425072 H2AFXP16104 143 aaPredicted RBP10.48□□□□□ -0.73
MDC1-205ENST00000425072 CA4P22748 312 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 GRIA2P42262 883 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 TNFRSF4P43489 277 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 RECQLP46063 649 aaPredicted RBP10.48□□□□□ -0.73
MDC1-205ENST00000425072 SCNN1BP51168 640 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 NRLP54845 237 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 RHOAP61586 193 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 ARF5P84085 180 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 DHX9Q08211 1270 aaKnown RBP10.48□□□□□ -0.73
MDC1-205ENST00000425072 GRM3Q14832 879 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 HIF1AQ16665 826 aa10.48□□□□□ -0.73
MDC1-205ENST00000425072 ACCSLQ4AC99 568 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms