RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PITRM1Q5JRX3 1037 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 RBM20Q5T481 1227 aaKnown RBP12.07□□□□□ -0.48
LIMK1-202ENST00000418310 MFSD6LQ8IWD5 586 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 DCUN1D1Q96GG9 259 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 SLC45A3Q96JT2 553 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 FSD1LQ9BXM9 530 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 BRD8Q9H0E9 1235 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 IL1RL2Q9HB29 575 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 CCDC167Q9P0B6 97 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 FBXW11Q9UKB1 542 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 DERAQ9Y315 318 aa12.07□□□□□ -0.48
LIMK1-202ENST00000418310 COL1A2P08123 1366 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 LRRC37A2A6NM11 1700 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 C15orf38-AP3S2A0A0A6YYH1 394 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 KCNU1A8MYU2 1149 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 ZNF487B1APH4 448 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 SLC4A1P02730 911 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 PNPLA4P41247 253 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 PGFP49763 221 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 SLC12A2P55011 1212 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 PPIDQ08752 370 aaKnown RBP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 CDH17Q12864 832 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 PPP1R3AQ16821 1122 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 OLFML2BQ68BL8 750 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 ARPINQ7Z6K5 226 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 CENPLQ8N0S6 344 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 DNAJC1Q96KC8 554 aaKnown RBP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 NR1H4Q96RI1 486 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 POMKQ9H5K3 350 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 WDR41Q9HAD4 459 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 GDAP2Q9NXN4 497 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 RCOR3Q9P2K3 495 aaPredicted RBP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 MATN2O00339 956 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 GRID2O43424 1007 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 DNAJA2O60884 412 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 SPATA31D3P0C874 917 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 CDK7P50613 346 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 TAS2R39P59534 338 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 PRPSAP1Q14558 356 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 TLR1Q15399 786 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 CYTH1Q15438 398 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 GSTA3Q16772 222 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.06□□□□□ -0.48
LIMK1-202ENST00000418310 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 ITPRIPL1Q6GPH6 555 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 LRRC8EQ6NSJ5 796 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 SPATA31D4Q6ZUB0 917 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 PQLC1Q8N2U9 271 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 ATPAF2Q8N5M1 289 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 SLC39A3Q9BRY0 314 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 ACOT9Q9Y305 439 aa12.06□□□□□ -0.48
LIMK1-202ENST00000418310 A0A1B0GTW7 788 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 B3GAT3O94766 335 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 MPOP05164 745 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 OR4Q2P0C623 313 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 THRAP10827 490 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 SLC1A2P43004 574 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 SATB1Q01826 763 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 AAGABQ6PD74 315 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 CNSTQ6PJW8 725 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 CYS1Q717R9 158 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 GALNT15Q8N3T1 639 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 MYLPFQ96A32 169 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 TEKT5Q96M29 485 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 GRIP2Q9C0E4 1043 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 TRPV6Q9H1D0 765 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 ABHD16BQ9H3Z7 469 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 RAP2CQ9Y3L5 183 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 OTOFQ9HC10 1997 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 SNUPNO95149 360 aaKnown RBP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 KCNA5P22460 613 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 ROR2Q01974 943 aaKnown RBP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 RBBP5Q15291 538 aaKnown RBP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 STXBP5Q5T5C0 1151 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 OR9I1Q8NGQ6 314 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 KLHL5Q96PQ7 755 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 SLC2A13Q96QE2 648 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 CENPKQ9BS16 269 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 RTKNQ9BST9 563 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 IL22Q9GZX6 179 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 STN1Q9H668 368 aaKnown RBP12.05□□□□□ -0.48
LIMK1-202ENST00000418310 TNFRSF12AQ9NP84 129 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 GIMAP2Q9UG22 337 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 RGSL1A5PLK6 1076 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 OR51F1A6NGY5 319 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 TOMM70O94826 608 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 DDHD2O94830 711 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 STMN1P16949 149 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 GEN1Q17RS7 908 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 CLEC6AQ6EIG7 209 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 NAPEPLDQ6IQ20 393 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 SCN4BQ8IWT1 228 aa12.05□□□□□ -0.48
LIMK1-202ENST00000418310 TXNDC5Q8NBS9 432 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms